C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137770 CTDSPL2 9606 + 15:44427234-44529038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260327 CTDSPL2-001 44427234-44529038 protein_coding
  ENST00000558373 CTDSPL2-003 44459003-44527232 protein_coding
  ENST00000558791 CTDSPL2-010 44427622-44490804 protein_coding
  ENST00000558966 CTDSPL2-002 44427793-44524543 protein_coding
  ENST00000558968 CTDSPL2-006 44427814-44484314 protein_coding
  ENST00000559175 CTDSPL2-004 44519637-44525947 retained_intron
  ENST00000559738 CTDSPL2-009 44519224-44524436 processed_transcript
  ENST00000559793 CTDSPL2-005 44427808-44486578 protein_coding
  ENST00000560620 CTDSPL2-008 44497027-44521406 nonsense_mediated_decay
  ENST00000560834 CTDSPL2-011 44427642-44484347 processed_transcript
  ENST00000561189 CTDSPL2-007 44490992-44503879 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260327ENST00000558373ENST00000558966ENST00000559175ENST00000560834
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260327 4.848±0.00 2.696±0.00 2.345±0.00 0.879±0.00 3.135±0.25 2.032±0.46 0.848±0.06 1.362±0.00 1.308±0.79 4.795±0.00 1.157±0.00 2.307±0.86 1.275±0.84 1.799±0.73
ENST00000558373 N/A N/A N/A N/A 1.602±0.00 1.110±0.00 1.116±0.00 1.143±0.39 0.285±0.00 N/A 0.721±0.00 1.828±0.33 1.388±0.77 3.225±1.35
ENST00000558966 N/A N/A N/A 2.007±0.00 N/A N/A N/A N/A N/A 5.912±0.00 N/A 4.381±0.00 N/A 3.967±0.30
ENST00000559175 N/A N/A N/A N/A N/A N/A 0.769±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560834 N/A N/A N/A N/A N/A N/A N/A 4.677±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QJ CIL_0004QJ_0002 CGP 15:44288729-44529038
CIL_000686 CIL_000686_0001 CGP 15:44427234-44563029

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005515 IEA protein binding
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060586 ctdspl2b CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b protein_coding Danio_rerio
ENSDARG00000061587 ctdspl2a CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2a protein_coding Danio_rerio
ENSMUSG00000033411 Ctdspl2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 protein_coding Mus_musculus

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