C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000560834 CTDSPL2-011 ENSG00000137770 9606 + 15:44427642-44484347 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000560834
Transcript ID Kidney
ENST00000560834 4.677±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QJ CIL_0004QJ_0002 CGP 15:44288729-44529038
CIL_000686 CIL_000686_0001 CGP 15:44427234-44563029

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140570 Ctdspl2-002 processed_transcript Mus_musculus 0 497
ENSMUST00000131258 Ctdspl2-008 retained_intron Mus_musculus 0 492
ENSMUST00000138920 Ctdspl2-007 retained_intron Mus_musculus 0 492
ENSMUST00000128883 Ctdspl2-004 processed_transcript Mus_musculus 0 492
ENSMUST00000110578 Ctdspl2-003 protein_coding Mus_musculus 0 492
ENSMUST00000036647 Ctdspl2-001 protein_coding Mus_musculus 0 492
ENSMUST00000110572 Ctdspl2-006 protein_coding Mus_musculus 3e-40 169
ENSMUST00000110574 Ctdspl2-005 protein_coding Mus_musculus 3e-40 169

Loading