C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033411 Ctdspl2 10090 + 2:121956001-122013642 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036647 Ctdspl2-001 121956001-122013642 protein_coding
  ENSMUST00000110572 Ctdspl2-006 121969082-122013591 protein_coding
  ENSMUST00000110574 Ctdspl2-005 121956659-122010723 protein_coding
  ENSMUST00000110578 Ctdspl2-003 121956411-122012388 protein_coding
  ENSMUST00000127265 Ctdspl2-009 121978812-122003963 retained_intron
  ENSMUST00000128883 Ctdspl2-004 121956486-121993783 processed_transcript
  ENSMUST00000131258 Ctdspl2-008 121956486-121990394 retained_intron
  ENSMUST00000138920 Ctdspl2-007 121956460-121994196 retained_intron
  ENSMUST00000140570 Ctdspl2-002 121956480-122012615 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036647ENSMUST00000110572ENSMUST00000110574ENSMUST00000110578ENSMUST00000131258ENSMUST00000138920ENSMUST00000140570
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036647 0.888±0.34 0.912±0.00 1.372±0.00 2.826±0.00 0.599±0.14 0.403±0.12 0.666±0.10 0.992±0.34 2.801±1.27 1.032±0.40 0.332±0.18 0.940±0.39 2.910±1.75 1.448±0.05
ENSMUST00000110572 N/A 1.356±0.00 N/A 2.007±0.69 0.863±0.00 0.727±0.00 0.353±0.00 N/A 0.659±0.24 1.182±0.28 0.254±0.00 1.861±0.78 1.694±0.66 N/A
ENSMUST00000110574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.901±0.85 4.736±1.92
ENSMUST00000110578 4.540±1.82 1.359±0.34 1.957±0.11 2.748±1.35 3.277±1.13 1.734±0.40 1.199±0.16 1.832±0.61 2.148±1.19 4.512±0.44 0.432±0.15 4.678±2.22 2.878±1.23 3.661±1.49
ENSMUST00000131258 N/A N/A N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138920 N/A N/A N/A N/A N/A 1.228±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140570 N/A 1.317±0.35 N/A 0.694±0.00 2.271±1.53 1.957±0.76 0.435±0.00 1.701±0.96 0.962±0.39 1.410±0.00 0.312±0.00 4.952±2.12 1.949±0.49 1.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000686 CIL_000686_0002 CGP 2:121956001-122056598

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060586 ctdspl2b CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b protein_coding Danio_rerio
ENSDARG00000061587 ctdspl2a CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2a protein_coding Danio_rerio
ENSG00000137770 CTDSPL2 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2 protein_coding Homo_sapiens

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