C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Ras-like without CAAX 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143622 RIT1 9606 - 1:155897808-155911404 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368322 RIT1-002 155900274-155910915 protein_coding
  ENST00000368323 RIT1-001 155897808-155911404 protein_coding
  ENST00000461050 RIT1-003 155900398-155911344 nonsense_mediated_decay
  ENST00000462687 RIT1-004 155910095-155910791 retained_intron
  ENST00000539040 RIT1-005 155900183-155911402 protein_coding
  ENST00000609492 RIT1-006 155900594-155910881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368322ENST00000368323ENST00000461050ENST00000539040ENST00000609492
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368322 N/A N/A N/A N/A N/A 5.101±0.00 3.028±0.00 6.378±0.00 1.311±0.00 9.083±0.00 N/A N/A 3.723±0.85 N/A
ENST00000368323 8.172±0.00 1.017±0.00 3.089±0.00 2.292±1.13 3.124±1.02 3.001±0.30 1.021±0.11 3.429±1.15 1.144±0.51 7.612±0.93 1.800±0.00 7.525±4.42 3.368±1.86 6.319±0.31
ENST00000461050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.808±0.00 N/A
ENST00000539040 N/A N/A N/A 2.877±0.00 3.296±0.00 N/A 1.356±0.00 N/A N/A N/A 2.067±0.00 9.018±0.00 3.009±0.00 N/A
ENST00000609492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.115±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0000CZ CIL_0000CZ_0002 CGP 1:155859509-155911404

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005516 TAS calmodulin binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 TAS:IEA signal transduction
GO:0007264 IEA:TAS small GTPase mediated signal transduction
GO:0007265 IDA Ras protein signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0048011 TAS neurotrophin TRK receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069150 rit1 Ras-like without CAAX 1 protein_coding Danio_rerio
ENSMUSG00000028057 Rit1 Ras-like without CAAX 1 protein_coding Mus_musculus

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