C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Ras-like without CAAX 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000461050 RIT1-003 ENSG00000143622 9606 - 1:155900398-155911344 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENST00000461050
Transcript ID Placenta
ENST00000461050 4.808±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000898 CIL_000898_0001 VISTA 1:155789635-156392759
CIL_0008P5 CIL_0008P5_0001 VISTA 1:155795688-156399252
CIL_0000CZ CIL_0000CZ_0002 CGP 1:155859509-155911404

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029692 Rit1-001 protein_coding Mus_musculus 0 741
ENSMUST00000172252 Rit1-007 protein_coding Mus_musculus 0 610
ENSMUST00000172333 Rit1-006 nonsense_mediated_decay Mus_musculus 0 610
ENSMUST00000170377 Rit1-002 nonsense_mediated_decay Mus_musculus 0 468
ENSMUST00000171645 Rit1-004 protein_coding Mus_musculus 0 429
ENSMUST00000166234 Rit1-003 retained_intron Mus_musculus 0 322
ENSMUST00000172187 Rit1-008 retained_intron Mus_musculus 0 226
ENSMUST00000165846 Rit1-005 retained_intron Mus_musculus 0 222

Loading