C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, Ca++ transporting, plasma membrane 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157087 ATP2B2 9606 - 3:10324023-10708031 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352432 ATP2B2-001 10324023-10449613 protein_coding
  ENST00000360273 ATP2B2-201 10324023-10505584 protein_coding
  ENST00000383800 ATP2B2-002 10324023-10505657 protein_coding
  ENST00000397077 ATP2B2-005 10324023-10708031 protein_coding
  ENST00000452124 ATP2B2-003 10328098-10410675 protein_coding
  ENST00000460129 ATP2B2-004 10324023-10534133 nonsense_mediated_decay
  ENST00000467702 ATP2B2-006 10328446-10336300 processed_transcript
  ENST00000468426 ATP2B2-009 10328811-10332324 processed_transcript
  ENST00000480680 ATP2B2-008 10387884-10505584 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000352432ENST00000383800ENST00000397077ENST00000452124ENST00000467702ENST00000480680
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000352432 0.039±0.00 0.058±0.00 8.287±0.00 0.175±0.00 0.041±0.00 0.008±0.01 0.991±0.91 1.023±0.99 0.004±0.00 N/A 0.069±0.05 0.094±0.00 0.312±0.00
ENST00000383800 N/A N/A 13.845±0.54 N/A N/A N/A N/A N/A N/A 0.618±0.25 N/A N/A 0.095±0.00
ENST00000397077 N/A N/A 5.248±1.02 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452124 N/A N/A 6.105±0.00 0.077±0.04 N/A 0.013±0.00 N/A N/A N/A 0.899±0.00 0.109±0.00 0.017±0.00 0.160±0.00
ENST00000467702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A
ENST00000480680 N/A N/A N/A N/A 0.062±0.00 N/A N/A 0.154±0.00 N/A N/A 0.027±0.00 0.042±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064R CIL_00064R_0001 CGP 3:10293131-10708031
CIL_0001NW CIL_0001NW_0001 CGP 3:10324023-10940733

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000902 IEA cell morphogenesis
GO:0005388 NAS:IEA calcium-transporting ATPase activity
GO:0005509 IDA calcium ion binding
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005737 IDA cytoplasm
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005929 IEA cilium
GO:0006200 IEA ATP catabolic process
GO:0006810 NAS transport
GO:0006816 IMP calcium ion transport
GO:0006874 IEA cellular calcium ion homeostasis
GO:0006996 IEA organelle organization
GO:0007595 IEA lactation
GO:0007596 TAS blood coagulation
GO:0007605 IMP sensory perception of sound
GO:0007626 IEA locomotory behavior
GO:0008022 IPI protein C-terminus binding
GO:0008152 IEA metabolic process
GO:0008361 IEA regulation of cell size
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016324 IEA apical plasma membrane
GO:0021549 IEA cerebellum development
GO:0021692 IEA cerebellar Purkinje cell layer morphogenesis
GO:0021702 IEA cerebellar Purkinje cell differentiation
GO:0021707 IEA cerebellar granule cell differentiation
GO:0030165 IDA PDZ domain binding
GO:0030182 IDA neuron differentiation
GO:0030899 IEA calcium-dependent ATPase activity
GO:0034220 TAS ion transmembrane transport
GO:0040011 IEA locomotion
GO:0042428 IEA serotonin metabolic process
GO:0042472 IEA inner ear morphogenesis
GO:0043025 IEA neuronal cell body
GO:0045299 IEA otolith mineralization
GO:0046068 IEA cGMP metabolic process
GO:0046872 IEA metal ion binding
GO:0048167 IEA regulation of synaptic plasticity
GO:0048839 IEA inner ear development
GO:0050808 IEA synapse organization
GO:0050885 IEA neuromuscular process controlling balance
GO:0050910 IEA detection of mechanical stimulus involved in sensory perception of sound
GO:0051480 IMP cytosolic calcium ion homeostasis
GO:0051928 IEA positive regulation of calcium ion transport
GO:0055085 TAS transmembrane transport
GO:0060088 IEA auditory receptor cell stereocilium organization
GO:0060113 IEA inner ear receptor cell differentiation
GO:0070588 IEA calcium ion transmembrane transport
GO:0090102 IEA cochlea development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063433 atp2b2 ATPase, Ca++ transporting, plasma membrane 2 protein_coding Danio_rerio
ENSMUSG00000030302 Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 protein_coding Mus_musculus

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