C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ATPase, Ca++ transporting, plasma membrane 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480680 ATP2B2-008 ENSG00000157087 9606 - 3:10387884-10505584 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryPlacentaENST00000480680
Transcript ID Colon Liver Ovary Placenta
ENST00000480680 0.062±0.00 0.154±0.00 0.027±0.00 0.042±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064R CIL_00064R_0001 CGP 3:10293131-10708031
CIL_0001NW CIL_0001NW_0001 CGP 3:10324023-10940733

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135199 Atp2b2-005 retained_intron Mus_musculus 0 1591
ENSMUST00000089003 Atp2b2-004 protein_coding Mus_musculus 0 1565
ENSMUST00000101044 Atp2b2-003 protein_coding Mus_musculus 0 1483
ENSMUST00000101045 Atp2b2-001 protein_coding Mus_musculus 0 1480
ENSMUST00000152831 Atp2b2-002 nonsense_mediated_decay Mus_musculus 0 1480
ENSDART00000092725 atp2b3b-201 protein_coding Danio_rerio 0 483
ENSDART00000153828 atp2b3b-001 protein_coding Danio_rerio 0 483
ENSMUST00000144507 Atp2b2-006 processed_transcript Mus_musculus 0 222
ENSMUST00000154738 Atp2b2-007 processed_transcript Mus_musculus 2e-22 111

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