C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hedgehog interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164161 HHIP 9606 + 4:144646021-144745271 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000296575 HHIP-001 144646021-144745271 protein_coding
  ENST00000434550 HHIP-002 144646172-144660273 protein_coding
  ENST00000503090 HHIP-005 144734867-144738893 processed_transcript
  ENST00000505891 HHIP-008 144647099-144659776 processed_transcript
  ENST00000509630 HHIP-004 144652659-144685665 processed_transcript
  ENST00000511314 HHIP-003 144648180-144659856 processed_transcript
  ENST00000512791 HHIP-006 144708131-144715623 retained_intron
  ENST00000515080 HHIP-007 144650615-144658839 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296575ENST00000434550ENST00000509630ENST00000512791
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296575 0.051±0.00 0.065±0.00 0.405±0.00 3.394±0.58 0.794±0.46 1.446±0.96 0.059±0.00 1.585±1.14 0.875±0.26 3.840±2.11 0.056±0.00 0.141±0.05 0.018±0.01 1.859±1.37
ENST00000434550 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.992±0.90 N/A 0.426±0.00 N/A N/A
ENST00000509630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.203±0.00 0.073±0.00 N/A
ENST00000512791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.900±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YO CIL_0008YO_0001 VISTA 4:144055661-144657567
CIL_0008YM CIL_0008YM_0001 VISTA 4:144347096-144948803
CIL_0007O9 CIL_0007O9_0001 UCNEbase 4:144356342-145043587
CIL_0008YN CIL_0008YN_0001 VISTA 4:144638849-145240129

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005515 IPI:IEA protein binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0005887 ISS integral component of plasma membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0007165 IEA signal transduction
GO:0007224 IEA smoothened signaling pathway
GO:0007405 IEA neuroblast proliferation
GO:0008270 IDA zinc ion binding
GO:0009887 IEA organ morphogenesis
GO:0009953 IEA dorsal/ventral pattern formation
GO:0009968 IDA negative regulation of signal transduction
GO:0009986 IEA cell surface
GO:0016901 IEA oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
GO:0040036 IEA regulation of fibroblast growth factor receptor signaling pathway
GO:0045879 ISS negative regulation of smoothened signaling pathway
GO:0048038 IEA quinone binding
GO:0048705 ISS skeletal system morphogenesis
GO:0055114 IEA oxidation-reduction process
GO:0060441 IEA epithelial tube branching involved in lung morphogenesis
GO:0097108 IPI hedgehog family protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060397 hhip hedgehog interacting protein protein_coding Danio_rerio
ENSMUSG00000064325 Hhip Hedgehog-interacting protein protein_coding Mus_musculus

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