C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hedgehog interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434550 HHIP-002 ENSG00000164161 9606 + 4:144646172-144660273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryENST00000434550
Transcript ID Lung Ovary
ENST00000434550 4.992±0.90 0.426±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YO CIL_0008YO_0001 VISTA 4:144055661-144657567
CIL_0008YM CIL_0008YM_0001 VISTA 4:144347096-144948803
CIL_0007O9 CIL_0007O9_0001 UCNEbase 4:144356342-145043587
CIL_0008YN CIL_0008YN_0001 VISTA 4:144638849-145240129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005737 IEA cytoplasm
GO:0005887 ISS integral component of plasma membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0008270 IDA zinc ion binding
GO:0009968 IDA negative regulation of signal transduction
GO:0016901 IEA oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
GO:0045879 ISS negative regulation of smoothened signaling pathway
GO:0048038 IEA quinone binding
GO:0048705 ISS skeletal system morphogenesis
GO:0055114 IEA oxidation-reduction process
GO:0097108 IPI hedgehog family protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079038 Hhip-001 protein_coding Mus_musculus 0 1090

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