C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuron navigator 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000166833 NAV2 9606 + 11:19350724-20121598 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000349880 NAV2-003 19713366-20121598 protein_coding
  ENST00000360655 NAV2-008 19350724-20121598 protein_coding
  ENST00000396085 NAV2-002 19713335-20121598 protein_coding
  ENST00000396087 NAV2-001 19713597-20118574 protein_coding
  ENST00000525025 NAV2-012 20107245-20114680 retained_intron
  ENST00000525322 NAV2-006 20022838-20080184 protein_coding
  ENST00000526675 NAV2-011 20027554-20044995 processed_transcript
  ENST00000527559 NAV2-201 19713335-20121598 protein_coding
  ENST00000528008 NAV2-014 19931765-19933719 processed_transcript
  ENST00000528923 NAV2-013 20114383-20118282 retained_intron
  ENST00000530408 NAV2-009 20022845-20044991 protein_coding
  ENST00000533746 NAV2-004 20104211-20118581 retained_intron
  ENST00000533917 NAV2-005 20022556-20118603 protein_coding
  ENST00000534229 NAV2-007 19777802-19880127 processed_transcript
  ENST00000534299 NAV2-010 20027255-20044991 processed_transcript
  ENST00000540292 NAV2-202 19713335-20121598 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349880ENST00000360655ENST00000396085ENST00000396087ENST00000525322ENST00000527559ENST00000533917ENST00000534229
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349880 N/A 0.513±0.00 N/A 0.612±0.00 N/A N/A N/A 0.490±0.00 0.706±0.00 N/A N/A N/A N/A
ENST00000360655 N/A 0.633±0.00 0.455±0.00 N/A 1.113±0.00 N/A 0.584±0.00 N/A N/A N/A N/A 0.874±0.00 0.235±0.00
ENST00000396085 0.456±0.00 N/A N/A N/A 0.518±0.00 0.444±0.19 N/A N/A 1.333±0.00 N/A 0.614±0.00 0.906±0.02 0.293±0.00
ENST00000396087 1.022±0.00 N/A N/A N/A N/A 0.930±0.00 N/A N/A N/A 0.184±0.00 N/A N/A N/A
ENST00000525322 N/A N/A 1.887±0.00 N/A N/A N/A N/A N/A N/A N/A 0.559±0.00 N/A N/A
ENST00000527559 N/A 0.598±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533917 N/A N/A N/A 1.131±0.00 N/A N/A N/A 1.045±0.00 N/A N/A 0.642±0.00 2.141±0.00 N/A
ENST00000534229 N/A N/A N/A N/A 5.928±0.00 N/A N/A N/A N/A 1.958±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RI CIL_0008RI_0001 VISTA 11:18872537-19474989
CIL_0008YB CIL_0008YB_0001 VISTA 11:18916805-19520451
CIL_0004AV CIL_0004AV_0002 CGP 11:19224063-20121598
CIL_0004AW CIL_0004AW_0002 CGP 11:19350724-20160613

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003025 IEA regulation of systemic arterial blood pressure by baroreceptor feedback
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005614 IEA interstitial matrix
GO:0005634 IDA nucleus
GO:0007399 IEA nervous system development
GO:0007605 IEA sensory perception of sound
GO:0007608 IEA sensory perception of smell
GO:0007626 IEA locomotory behavior
GO:0008152 IEA metabolic process
GO:0008201 IEA heparin binding
GO:0021554 IEA optic nerve development
GO:0021563 IEA glossopharyngeal nerve development
GO:0021564 IEA vagus nerve development
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001879 nav2b neuron navigator 2b protein_coding Danio_rerio
ENSDARG00000073688 NAV2 (2 of 2) neuron navigator 2 protein_coding Danio_rerio
ENSMUSG00000052512 Nav2 neuron navigator 2 protein_coding Mus_musculus

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