C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: neuron navigator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533917 NAV2-005 ENSG00000166833 9606 + 11:20022556-20118603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLiverOvaryPlacentaENST00000533917
Transcript ID Breast Liver Ovary Placenta
ENST00000533917 1.131±0.00 1.045±0.00 0.642±0.00 2.141±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RI CIL_0008RI_0001 VISTA 11:18872537-19474989
CIL_0008YB CIL_0008YB_0001 VISTA 11:18916805-19520451
CIL_0004AV CIL_0004AV_0002 CGP 11:19224063-20121598
CIL_0004AW CIL_0004AW_0002 CGP 11:19350724-20160613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004386 IEA helicase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000064395 Nav2-201 protein_coding Mus_musculus 0 3570
ENSMUST00000184945 Nav2-009 protein_coding Mus_musculus 0 3570
ENSMUST00000183659 Nav2-006 protein_coding Mus_musculus 0 3559
ENSMUST00000184109 Nav2-012 protein_coding Mus_musculus 0 826
ENSMUST00000183715 Nav2-015 retained_intron Mus_musculus 0 296
ENSMUST00000184544 Nav2-011 retained_intron Mus_musculus 5e-17 95
ENSDART00000113332 NAV2 (2 of 2)-201 protein_coding Danio_rerio 0.00000000002 77

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