C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004AV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000057323-ENSDARG00000073688 CGP 7955 7:17351485-17790234
GeneTranscriptPositionBiotype
ENSDARG00000057323 (e2f8)
E2F transcription factor 8 		ENSDART00000079953 (e2f8-001) 17351491-17372368 protein_coding
ENSDART00000128488 (e2f8-201) 17351485-17372148 protein_coding
ENSDART00000131726 (e2f8-004) 17352209-17357425 protein_coding
ENSDART00000134548 (e2f8-003) 17368269-17372176 protein_coding
ENSDART00000144118 (e2f8-002) 17368348-17373447 protein_coding
ENSDARG00000073688 (NAV2 (2 of 2))
neuron navigator 2 		ENSDART00000113332 (NAV2 (2 of 2)-201) 17581711-17790234 protein_coding
CIL_0004AV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000129173-ENSG00000166833 CGP 9606 11:19224063-20121598
GeneTranscriptPositionBiotype
ENSG00000129173 (E2F8)
E2F transcription factor 8 		ENST00000250024 (E2F8-002) 19224535-19240951 protein_coding
ENST00000527884 (E2F8-001) 19224063-19241620 protein_coding
ENST00000529188 (E2F8-005) 19225520-19226078 processed_transcript
ENST00000532666 (E2F8-004) 19237347-19241598 protein_coding
ENST00000620009 (E2F8-201) 19224066-19241620 protein_coding
ENSG00000166833 (NAV2)
neuron navigator 2 		ENST00000349880 (NAV2-003) 19713366-20121598 protein_coding
ENST00000360655 (NAV2-008) 19350724-20121598 protein_coding
ENST00000396085 (NAV2-002) 19713335-20121598 protein_coding
ENST00000396087 (NAV2-001) 19713597-20118574 protein_coding
ENST00000525025 (NAV2-012) 20107245-20114680 retained_intron
ENST00000525322 (NAV2-006) 20022838-20080184 protein_coding
ENST00000526675 (NAV2-011) 20027554-20044995 processed_transcript
ENST00000527559 (NAV2-201) 19713335-20121598 protein_coding
ENST00000528008 (NAV2-014) 19931765-19933719 processed_transcript
ENST00000528923 (NAV2-013) 20114383-20118282 retained_intron
ENST00000530408 (NAV2-009) 20022845-20044991 protein_coding
ENST00000533746 (NAV2-004) 20104211-20118581 retained_intron
ENST00000533917 (NAV2-005) 20022556-20118603 protein_coding
ENST00000534229 (NAV2-007) 19777802-19880127 processed_transcript
ENST00000534299 (NAV2-010) 20027255-20044991 processed_transcript
ENST00000540292 (NAV2-202) 19713335-20121598 protein_coding
ENSG00000254453 (NAV2-AS2)
NAV2 antisense RNA 2 		ENST00000533767 (NAV2-AS2-001) 20043846-20049303 antisense
ENSG00000254542 (NAV2-AS3)
NAV2 antisense RNA 3 		ENST00000534036 (NAV2-AS3-001) 19978699-19981337 antisense
ENSG00000254544 (PCNAP4)
proliferating cell nuclear antigen pseudogene 4 		ENST00000532690 (PCNAP4-001) 19274540-19275269 processed_pseudogene
ENSG00000254622 (NAV2-AS4)
NAV2 antisense RNA 4 		ENST00000532874 (NAV2-AS4-001) 19510890-19519896 antisense
ENSG00000254894 (NAV2-AS1)
NAV2 antisense RNA 1 		ENST00000526642 (NAV2-AS1-001) 20119684-20120632 antisense
ENSG00000255043 (NAV2-AS5)
NAV2 antisense RNA 5 		ENST00000528726 (NAV2-AS5-001) 19502672-19507229 antisense
ENST00000530652 (NAV2-AS5-002) 19504891-19505900 antisense
ENSG00000255160 (RP11-428C19.5)
 ENST00000528326 (RP11-428C19.5-001) 19299883-19308358 lincRNA
ENST00000529082 (RP11-428C19.5-002) 19300002-19308358 lincRNA
ENSG00000255270 (NAV2-IT1)
NAV2 intronic transcript 1 (non-protein coding) 		ENST00000528204 (NAV2-IT1-001) 19380484-19385014 sense_intronic
ENSG00000255308 (RP11-428C19.4)
 ENST00000527978 (RP11-428C19.4-001) 19196775-19281426 antisense
ENSG00000264309 (MIR4694)
microRNA 4694 		ENST00000578534 (MIR4694-201) 19760004-19760083 miRNA
ENSG00000270607 (RP11-359E10.1)
 ENST00000603468 (RP11-359E10.1-001) 19710934-19712619 lincRNA
CIL_0004AV_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000046179-ENSMUSG00000052512 CGP 10090 7:48866429-49610090
GeneTranscriptPositionBiotype
ENSMUSG00000046179 (E2f8)
E2F transcription factor 8 		ENSMUST00000058745 (E2f8-002) 48866429-48881041 protein_coding
ENSMUST00000119223 (E2f8-001) 48866429-48881596 protein_coding
ENSMUST00000136142 (E2f8-003) 48878833-48881004 retained_intron
ENSMUST00000151139 (E2f8-004) 48872107-48875251 retained_intron
ENSMUSG00000085995 (Gm2788)
predicted gene 2788 		ENSMUST00000129551 (Gm2788-002) 48877958-48885961 processed_transcript
ENSMUST00000147173 (Gm2788-001) 48881300-48886608 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AV_0001ENSDARG00000057323ENSDART00000079953ENSDART00000128488ENSDART00000131726ENSDART00000134548ENSDART00000144118ENSDARG00000073688ENSDART00000113332CIL_0004AV_0002ENSG00000129173ENST00000250024ENST00000527884ENST00000529188ENST00000532666ENST00000620009ENSG00000166833ENST00000349880ENST00000360655ENST00000396085ENST00000396087ENST00000525025ENST00000525322ENST00000526675ENST00000527559ENST00000528008ENST00000528923ENST00000530408ENST00000533746ENST00000533917ENST00000534229ENST00000534299ENST00000540292ENSG00000254453ENST00000533767ENSG00000254542ENST00000534036ENSG00000254544ENST00000532690ENSG00000254622ENST00000532874ENSG00000254894ENST00000526642ENSG00000255043ENST00000528726ENST00000530652ENSG00000255160ENST00000528326ENST00000529082ENSG00000255270ENST00000528204ENSG00000255308ENST00000527978ENSG00000264309ENST00000578534ENSG00000270607ENST00000603468CIL_0004AV_0003ENSMUSG00000046179ENSMUST00000058745ENSMUST00000119223ENSMUST00000136142ENSMUST00000151139ENSMUSG00000085995ENSMUST00000129551ENSMUST00000147173
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AV_0001ENSDARG00000057323ENSDART00000079953ENSDART00000128488ENSDART00000131726ENSDART00000144118ENSDARG00000073688ENSDART00000113332CIL_0004AV_0002ENSG00000129173ENST00000250024ENST00000527884ENST00000532666ENST00000620009ENSG00000166833ENST00000349880ENST00000360655ENST00000396085ENST00000396087ENST00000525322ENST00000527559ENST00000533917ENST00000534229ENSG00000254453ENST00000533767ENSG00000254542ENST00000534036ENSG00000254544ENST00000532690ENSG00000254622ENST00000532874ENSG00000254894ENST00000526642ENSG00000255043ENST00000528726ENST00000530652ENSG00000255160ENST00000528326ENST00000529082ENSG00000255270ENST00000528204ENSG00000255308ENST00000527978ENSG00000264309ENST00000578534ENSG00000270607ENST00000603468CIL_0004AV_0003ENSMUSG00000046179ENSMUST00000058745ENSMUST00000119223ENSMUST00000136142ENSMUST00000151139ENSMUSG00000085995ENSMUST00000129551ENSMUST00000147173
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000057323 ENSDART00000079953 N/A N/A N/A N/A N/A N/A N/A 0.496±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000128488 N/A N/A N/A 0.179±0.13 N/A N/A 0.840±0.42 3.772±2.24 0.119±0.00 N/A 0.026±0.00 N/A N/A N/A
ENSDART00000131726 N/A N/A N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144118 N/A N/A N/A 0.291±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000073688 ENSDART00000113332 N/A N/A N/A 4.125±1.43 N/A N/A 3.745±2.48 1.180±0.35 0.411±0.00 N/A 0.982±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129173 ENST00000250024 0.105±0.00 N/A N/A N/A 0.046±0.00 N/A 0.197±0.04 0.161±0.00 0.013±0.00 0.105±0.00 0.889±0.26 0.352±0.37 0.171±0.09 0.189±0.00
ENST00000527884 N/A 0.094±0.00 N/A 0.006±0.00 0.069±0.00 0.116±0.00 0.248±0.00 0.013±0.00 N/A 0.027±0.00 N/A 0.526±0.44 0.308±0.05 0.389±0.04
ENST00000529188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532666 N/A N/A N/A N/A N/A N/A N/A N/A 0.190±0.18 N/A N/A 0.852±0.00 N/A 0.695±0.00
ENST00000620009 0.055±0.00 N/A N/A 0.006±0.00 0.062±0.00 N/A N/A 0.012±0.00 N/A 0.028±0.00 N/A N/A N/A N/A
ENSG00000166833 ENST00000349880 N/A 0.513±0.00 N/A N/A 0.612±0.00 N/A N/A N/A 0.490±0.00 0.706±0.00 N/A N/A N/A N/A
ENST00000360655 N/A 0.633±0.00 0.455±0.00 N/A N/A 1.113±0.00 N/A 0.584±0.00 N/A N/A N/A N/A 0.874±0.00 0.235±0.00
ENST00000396085 0.456±0.00 N/A N/A N/A N/A 0.518±0.00 0.444±0.19 N/A N/A 1.333±0.00 N/A 0.614±0.00 0.906±0.02 0.293±0.00
ENST00000396087 1.022±0.00 N/A N/A N/A N/A N/A 0.930±0.00 N/A N/A N/A 0.184±0.00 N/A N/A N/A
ENST00000525025 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525322 N/A N/A 1.887±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.559±0.00 N/A N/A
ENST00000526675 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527559 N/A 0.598±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533746 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533917 N/A N/A N/A N/A 1.131±0.00 N/A N/A N/A 1.045±0.00 N/A N/A 0.642±0.00 2.141±0.00 N/A
ENST00000534229 N/A N/A N/A N/A N/A 5.928±0.00 N/A N/A N/A N/A 1.958±0.00 N/A N/A N/A
ENST00000534299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254453 ENST00000533767 N/A N/A N/A N/A N/A N/A 12.049±6.73 N/A N/A N/A N/A N/A N/A N/A
ENSG00000254542 ENST00000534036 0.021±0.00 N/A N/A 0.022±0.00 N/A 0.294±0.00 N/A 0.055±0.03 N/A 0.038±0.00 N/A N/A 0.069±0.00 N/A
ENSG00000254544 ENST00000532690 N/A 0.016±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000254622 ENST00000532874 0.025±0.00 N/A 0.386±0.00 0.098±0.00 0.039±0.00 N/A N/A 0.162±0.06 0.284±0.00 0.307±0.00 0.572±0.00 0.375±0.00 0.360±0.25 0.072±0.03
ENSG00000254894 ENST00000526642 N/A 3.272±0.00 N/A N/A 7.047±0.00 4.355±0.00 N/A 8.394±0.00 N/A N/A 0.609±0.00 N/A N/A 2.577±0.00
ENSG00000255043 ENST00000528726 N/A 0.048±0.00 0.069±0.00 0.035±0.02 0.052±0.03 N/A 0.013±0.00 0.329±0.27 N/A N/A N/A 0.130±0.00 0.039±0.00 0.184±0.11
ENST00000530652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.170±0.03
ENSG00000255160 ENST00000528326 N/A 0.261±0.00 N/A N/A N/A N/A 0.128±0.00 N/A N/A 0.326±0.00 N/A N/A N/A N/A
ENST00000529082 N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A 1.180±0.80 N/A 0.085±0.02 N/A 0.087±0.00
ENSG00000255270 ENST00000528204 0.026±0.00 0.082±0.00 N/A 0.109±0.08 N/A 1.240±0.00 0.285±0.26 3.155±0.00 0.929±0.00 1.040±0.00 N/A N/A N/A N/A
ENSG00000255308 ENST00000527978 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.226±0.00 N/A 0.122±0.00 N/A N/A
ENSG00000264309 ENST00000578534 0.961±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270607 ENST00000603468 0.601±0.00 0.693±0.00 0.123±0.00 2.564±1.81 0.262±0.02 0.345±0.25 0.201±0.00 0.253±0.03 0.121±0.00 0.158±0.04 0.202±0.16 0.176±0.04 0.254±0.14 2.873±2.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000046179 ENSMUST00000058745 0.723±0.08 N/A 0.092±0.01 1.189±0.18 0.180±0.11 1.120±0.36 0.048±0.00 0.106±0.01 9.652±6.82 0.155±0.00 0.063±0.00 0.775±0.30 14.533±10.16 0.683±0.00
ENSMUST00000119223 0.192±0.14 0.124±0.03 0.119±0.06 0.461±0.32 0.172±0.08 1.083±0.14 0.133±0.02 0.065±0.01 4.477±2.80 0.142±0.05 0.033±0.02 0.989±0.70 19.709±18.90 1.801±0.50
ENSMUST00000136142 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.214±0.00 N/A N/A N/A
ENSMUSG00000085995 ENSMUST00000129551 N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 32.643±9.43 N/A N/A N/A N/A N/A
ENSMUST00000147173 N/A N/A N/A N/A N/A N/A N/A N/A 6.289±1.86 N/A 0.028±0.00 N/A N/A 2.475±0.17

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