C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuron navigator 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000360655 NAV2-008 ENSG00000166833 9606 + 11:19350724-20121598 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderColonKidneyPlacentaTestisENST00000360655
Transcript ID Adrenal Bladder Colon Kidney Placenta Testis
ENST00000360655 0.633±0.00 0.455±0.00 1.113±0.00 0.584±0.00 0.874±0.00 0.235±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RI CIL_0008RI_0001 VISTA 11:18872537-19474989
CIL_0008YB CIL_0008YB_0001 VISTA 11:18916805-19520451
CIL_0004AV CIL_0004AV_0002 CGP 11:19224063-20121598
CIL_0004AW CIL_0004AW_0002 CGP 11:19350724-20160613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004386 IEA helicase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0008152 IEA metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183659 Nav2-006 protein_coding Mus_musculus 0 8128
ENSMUST00000064395 Nav2-201 protein_coding Mus_musculus 0 8019
ENSMUST00000184945 Nav2-009 protein_coding Mus_musculus 0 8019
ENSMUST00000184124 Nav2-003 nonsense_mediated_decay Mus_musculus 0 1989
ENSMUST00000064383 Nav2-005 retained_intron Mus_musculus 0 1611
ENSMUST00000184155 Nav2-008 processed_transcript Mus_musculus 0 1310
ENSMUST00000184109 Nav2-012 protein_coding Mus_musculus 0 826
ENSMUST00000184955 Nav2-001 processed_transcript Mus_musculus 0 789
ENSMUST00000184928 Nav2-004 retained_intron Mus_musculus 0 612
ENSMUST00000184809 Nav2-002 retained_intron Mus_musculus 0 612
ENSMUST00000183715 Nav2-015 retained_intron Mus_musculus 0 296
ENSDART00000113332 NAV2 (2 of 2)-201 protein_coding Danio_rerio 5e-35 156
ENSMUST00000184544 Nav2-011 retained_intron Mus_musculus 9e-18 99

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