C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: homeobox D8
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000175879 HOXD8 9606 + 2:176129694-176132695 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000313173 HOXD8-001 176129740-176132029 protein_coding
  ENST00000429017 HOXD8-002 176129694-176132695 protein_coding
  ENST00000450510 HOXD8-003 176130357-176132000 protein_coding
  ENST00000544999 HOXD8-004 176130022-176132100 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000313173ENST00000429017ENST00000450510ENST00000544999
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000313173 N/A N/A N/A N/A 1.521±0.00 3.832±0.00 0.350±0.00 25.438±0.00 N/A 0.455±0.00 0.528±0.00 3.731±1.26 0.120±0.00 N/A
ENST00000429017 4.822±0.00 1.438±0.00 4.061±0.00 N/A 4.149±1.91 1.296±0.12 0.141±0.00 23.980±0.00 0.440±0.43 0.186±0.00 0.689±0.13 3.414±2.77 0.319±0.06 7.197±3.35
ENST00000450510 6.630±0.00 3.579±0.00 2.572±0.00 0.014±0.00 2.154±0.40 4.501±0.00 N/A N/A N/A 0.367±0.00 0.859±0.00 4.128±3.90 0.338±0.24 6.931±3.32
ENST00000544999 N/A N/A N/A N/A N/A 1.337±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_00090A CIL_00090A_0001 VISTA 2:175589301-176190657
CIL_0008JZ CIL_0008JZ_0001 VISTA 2:175775342-176376682
CIL_00017L CIL_00017L_0001 CGP 2:176122720-176132695
CIL_00017M CIL_00017M_0001 CGP 2:176129694-176173102

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 NAS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008595 NAS anterior/posterior axis specification, embryo
GO:0009952 IEA anterior/posterior pattern specification
GO:0043565 IEA sequence-specific DNA binding
GO:0048705 IEA skeletal system morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000027102 Hoxd8 homeobox D8 protein_coding Mus_musculus

Loading