C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: piggyBac transposable element derived 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000177614 PGBD5 9606 - 1:230314482-230425729 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000391860 PGBD5-001 230314482-230425729 protein_coding
  ENST00000525115 PGBD5-002 230323248-230377645 protein_coding
  ENST00000530424 PGBD5-003 230323542-230336295 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000391860ENST00000525115ENST00000530424
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000391860 0.134±0.00 0.049±0.00 5.252±1.82 0.155±0.00 0.075±0.01 0.299±0.21 0.216±0.00 0.427±0.41 0.119±0.00 0.071±0.03 0.162±0.01 0.314±0.03 0.828±0.20
ENST00000525115 N/A 0.605±0.00 N/A 0.344±0.00 0.134±0.08 1.220±1.02 0.638±0.00 1.807±0.00 0.418±0.00 0.277±0.00 0.590±0.35 0.640±0.15 1.808±0.00
ENST00000530424 N/A N/A N/A N/A N/A N/A 0.614±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A0 CIL_0008A0_0001 VISTA 1:229844601-230448319
CIL_000612 CIL_000612_0001 CGP 1:230057990-230425729
CIL_00060Z CIL_00060Z_0001 CGP 1:230314482-230693982

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011042 pgbd5 piggyBac transposable element derived 5 protein_coding Danio_rerio
ENSMUSG00000050751 Pgbd5 piggyBac transposable element derived 5 protein_coding Mus_musculus

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