C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: piggyBac transposable element derived 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530424 PGBD5-003 ENSG00000177614 9606 - 1:230323542-230336295 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000530424
Transcript ID Kidney
ENST00000530424 0.614±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008A0 CIL_0008A0_0001 VISTA 1:229844601-230448319
CIL_000612 CIL_000612_0001 CGP 1:230057990-230425729
CIL_00060Z CIL_00060Z_0001 CGP 1:230314482-230693982

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052580 Pgbd5-201 protein_coding Mus_musculus 0 416
ENSMUST00000136892 Pgbd5-002 protein_coding Mus_musculus 0 416
ENSMUST00000140012 Pgbd5-001 protein_coding Mus_musculus 0 416
ENSMUST00000172566 Pgbd5-003 protein_coding Mus_musculus 0 416
ENSMUST00000128312 Pgbd5-004 processed_transcript Mus_musculus 0 298
ENSMUST00000140126 Pgbd5-005 retained_intron Mus_musculus 0 270

Loading