C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAMTS-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380548 ADAMTSL1-012 ENSG00000178031 9606 + 9:18473894-18910950 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonKidneyLiverLungOvaryENST00000380548
Transcript ID Adipose Brain Breast Colon Kidney Liver Lung Ovary
ENST00000380548 0.609±0.00 0.070±0.00 0.161±0.00 0.658±0.00 0.688±0.00 0.080±0.06 0.183±0.08 0.231±0.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Y CIL_00013Y_0001 CGP 9:17579082-18910950
CIL_0007DA CIL_0007DA_0001 CGP 9:18473894-19049354

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107178 Adamtsl1-201 protein_coding Mus_musculus 0 4562
ENSMUST00000107177 Adamtsl1-005 retained_intron Mus_musculus 0 3940
ENSMUST00000141889 Adamtsl1-001 protein_coding Mus_musculus 0 3384
ENSMUST00000048885 Adamtsl1-002 protein_coding Mus_musculus 0 2187
ENSMUST00000150043 Adamtsl1-004 retained_intron Mus_musculus 0 1338
ENSMUST00000120678 Adamtsl1-003 protein_coding Mus_musculus 0 856
ENSMUST00000136320 Adamtsl1-008 protein_coding Mus_musculus 0 647
ENSMUST00000130474 Adamtsl1-009 retained_intron Mus_musculus 0 412
ENSMUST00000126654 Adamtsl1-007 retained_intron Mus_musculus 5e-24 119

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