C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAMTS-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380566 ADAMTSL1-002 ENSG00000178031 9606 + 9:18474169-18681483 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonENST00000380566
Transcript ID Bladder Breast Colon
ENST00000380566 0.319±0.00 0.655±0.00 0.733±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013Y CIL_00013Y_0001 CGP 9:17579082-18910950
CIL_0007DA CIL_0007DA_0001 CGP 9:18473894-19049354

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IEA metalloendopeptidase activity
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008237 IEA metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107178 Adamtsl1-201 protein_coding Mus_musculus 0 1725
ENSMUST00000048885 Adamtsl1-002 protein_coding Mus_musculus 0 1380
ENSMUST00000141889 Adamtsl1-001 protein_coding Mus_musculus 0 1380
ENSMUST00000150043 Adamtsl1-004 retained_intron Mus_musculus 0 1341
ENSMUST00000136320 Adamtsl1-008 protein_coding Mus_musculus 0 907
ENSMUST00000120678 Adamtsl1-003 protein_coding Mus_musculus 0 841
ENSMUST00000130474 Adamtsl1-009 retained_intron Mus_musculus 0 313
ENSMUST00000126654 Adamtsl1-007 retained_intron Mus_musculus 1e-24 119

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