C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DENN/MADD domain containing 5A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000184014 DENND5A 9606 - 11:9138825-9265390 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000328194 DENND5A-001 9138825-9265390 protein_coding
  ENST00000524446 DENND5A-011 9145062-9152407 protein_coding
  ENST00000525784 DENND5A-014 9139689-9145815 protein_coding
  ENST00000526523 DENND5A-010 9175240-9178248 processed_transcript
  ENST00000526707 DENND5A-002 9145713-9265127 nonsense_mediated_decay
  ENST00000527700 DENND5A-004 9139504-9172245 retained_intron
  ENST00000527896 DENND5A-009 9169923-9178917 nonsense_mediated_decay
  ENST00000528725 DENND5A-016 9139503-9144179 protein_coding
  ENST00000529977 DENND5A-005 9138830-9145460 retained_intron
  ENST00000530044 DENND5A-003 9139459-9265087 protein_coding
  ENST00000530780 DENND5A-006 9204066-9265101 nonsense_mediated_decay
  ENST00000530867 DENND5A-008 9177930-9178949 retained_intron
  ENST00000531580 DENND5A-012 9146797-9150759 retained_intron
  ENST00000531747 DENND5A-013 9141941-9150173 nonsense_mediated_decay
  ENST00000532696 DENND5A-007 9203532-9206718 retained_intron
  ENST00000533737 DENND5A-015 9139515-9143452 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328194ENST00000526707ENST00000527700ENST00000528725ENST00000529977ENST00000530044ENST00000531747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328194 8.904±0.00 16.818±0.00 N/A 14.762±9.94 12.913±11.24 9.571±8.28 12.750±10.02 10.253±0.00 2.680±0.12 15.118±11.99 6.413±0.00 11.745±4.67 9.348±1.40 11.088±6.52
ENST00000526707 N/A N/A 1.011±0.00 11.309±0.00 N/A N/A N/A N/A N/A N/A 0.827±0.00 0.764±0.00 N/A N/A
ENST00000527700 N/A N/A 0.919±0.00 N/A N/A 1.004±0.00 1.817±0.00 0.384±0.00 2.115±0.00 N/A 0.718±0.00 2.223±1.11 N/A N/A
ENST00000528725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.374±0.00 N/A
ENST00000529977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.183±0.00 N/A N/A
ENST00000530044 N/A N/A 1.852±0.00 5.524±0.00 3.454±0.00 1.186±0.00 3.781±1.85 0.526±0.00 3.794±0.00 2.412±0.00 0.455±0.00 0.975±0.00 4.787±0.00 3.549±0.00
ENST00000531747 N/A N/A N/A N/A N/A N/A N/A 1.412±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000499 CIL_000499_0001 CGP 11:9020391-9265390
CIL_0001HO CIL_0001HO_0002 CGP 11:9138825-9314780

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0016020 IBA membrane
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0017137 IEA Rab GTPase binding
GO:0032851 IDA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017006 dennd5a DENN/MADD domain containing 5A protein_coding Danio_rerio
ENSMUSG00000035901 Dennd5a DENN/MADD domain containing 5A protein_coding Mus_musculus

Loading