C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000328194 DENND5A-001 ENSG00000184014 9606 - 11:9138825-9265390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000328194
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000328194 8.904±0.00 16.818±0.00 14.762±9.94 12.913±11.24 9.571±8.28 12.750±10.02 10.253±0.00 2.680±0.12 15.118±11.99 6.413±0.00 11.745±4.67 9.348±1.40 11.088±6.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000499 CIL_000499_0001 CGP 11:9020391-9265390
CIL_0001HO CIL_0001HO_0002 CGP 11:9138825-9314780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005794 IEA Golgi apparatus
GO:0016020 IBA membrane
GO:0017112 IDA Rab guanyl-nucleotide exchange factor activity
GO:0017137 IEA Rab GTPase binding
GO:0032851 IDA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080437 Dennd5a-001 protein_coding Mus_musculus 0 5963
ENSMUST00000106722 Dennd5a-002 protein_coding Mus_musculus 0 5500
ENSDART00000060545 dennd5a-201 protein_coding Danio_rerio 0 1905
ENSMUST00000154002 Dennd5a-003 retained_intron Mus_musculus 0 1458
ENSMUST00000130354 Dennd5a-008 retained_intron Mus_musculus 0 1018
ENSMUST00000151923 Dennd5a-004 processed_transcript Mus_musculus 0 597
ENSMUST00000139579 Dennd5a-005 processed_transcript Mus_musculus 0 316
ENSMUST00000156858 Dennd5a-007 retained_intron Mus_musculus 0 215

Loading