C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DENN/MADD domain containing 5A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527700 DENND5A-004 ENSG00000184014 9606 - 11:9139504-9172245 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartKidneyLiverMuscleOvaryENST00000527700
Transcript ID Bladder Colon Heart Kidney Liver Muscle Ovary
ENST00000527700 0.919±0.00 1.004±0.00 1.817±0.00 0.384±0.00 2.115±0.00 0.718±0.00 2.223±1.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000499 CIL_000499_0001 CGP 11:9020391-9265390
CIL_0001HO CIL_0001HO_0002 CGP 11:9138825-9314780

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106722 Dennd5a-002 protein_coding Mus_musculus 0 2715
ENSMUST00000080437 Dennd5a-001 protein_coding Mus_musculus 0 2715
ENSDART00000060545 dennd5a-201 protein_coding Danio_rerio 0 992
ENSMUST00000154002 Dennd5a-003 retained_intron Mus_musculus 0 850
ENSMUST00000130354 Dennd5a-008 retained_intron Mus_musculus 0 584
ENSMUST00000156858 Dennd5a-007 retained_intron Mus_musculus 0 215

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