C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000287912 RBM33-008 ENSG00000184863 9606 + 7:155644451-155701183 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverMuscleOvaryPlacentaTestisENST00000287912
Transcript ID Bladder Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENST00000287912 18.747±0.00 19.834±0.00 21.245±0.00 18.669±0.00 19.892±0.00 5.063±0.00 9.896±0.00 3.465±3.03 11.149±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KT CIL_0008KT_0001 VISTA 7:155171352-155773114
CIL_000962 CIL_000962_0001 VISTA 7:155454922-156056094
CIL_0006DB CIL_0006DB_0002 CGP 7:155474206-155781485
CIL_0006DC CIL_0006DC_0002 CGP 7:155644451-155812273

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090355 Rbm33-002 protein_coding Mus_musculus 0 1074
ENSMUST00000114884 Rbm33-003 protein_coding Mus_musculus 0 1059
ENSMUST00000059644 Rbm33-201 protein_coding Mus_musculus 0 787
ENSMUST00000030920 Rbm33-001 protein_coding Mus_musculus 0 771

Loading