C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: galactose-3-O-sulfotransferase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000498000 GAL3ST4-008 ENSG00000197093 9606 - 7:100160729-100168142 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungENST00000498000
Transcript ID Brain Lung
ENST00000498000 0.992±0.00 1.646±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0005BN CIL_0005BN_0002 CGP 7:100154420-100168750
CIL_0005CG CIL_0005CG_0001 CGP 7:100159244-100177372

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000162557 Gal3st4-004 processed_transcript Mus_musculus 0 547
ENSMUST00000161665 Gal3st4-005 protein_coding Mus_musculus 0 294
ENSMUST00000159067 Gpc2-007 nonsense_mediated_decay Mus_musculus 0 292
ENSMUST00000161279 Gal3st4-001 protein_coding Mus_musculus 0 292
ENSMUST00000100530 Gal3st4-003 protein_coding Mus_musculus 0 292
ENSMUST00000161647 Gal3st4-002 protein_coding Mus_musculus 5e-24 115

Loading