C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FCH and double SH3 domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197948 FCHSD1 9606 - 5:141639302-141651419 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000435817 FCHSD1-001 141639302-141651419 protein_coding
  ENST00000518160 FCHSD1-008 141641209-141642704 processed_transcript
  ENST00000518499 FCHSD1-011 141644630-141646364 protein_coding
  ENST00000519800 FCHSD1-002 141647884-141651387 protein_coding
  ENST00000520747 FCHSD1-006 141639303-141642621 retained_intron
  ENST00000522126 FCHSD1-003 141640982-141651117 nonsense_mediated_decay
  ENST00000522386 FCHSD1-009 141646672-141647831 processed_transcript
  ENST00000522763 FCHSD1-010 141646508-141647529 processed_transcript
  ENST00000522783 FCHSD1-005 141640987-141651376 protein_coding
  ENST00000523856 FCHSD1-004 141639308-141647483 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000435817ENST00000519800ENST00000520747ENST00000522126ENST00000522386ENST00000522783ENST00000523856
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000435817 1.134±0.00 2.354±0.00 N/A N/A 0.291±0.00 0.459±0.00 0.205±0.00 1.033±0.00 0.189±0.00 2.143±0.00 0.096±0.00 2.509±1.23 2.306±0.00 1.773±0.55
ENST00000519800 N/A N/A 0.584±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520747 N/A 1.680±0.00 N/A 1.462±0.16 N/A 0.367±0.00 0.059±0.00 N/A 0.089±0.00 N/A 0.147±0.00 1.350±0.37 N/A N/A
ENST00000522126 0.866±0.00 N/A N/A N/A N/A 0.970±0.00 N/A N/A 0.667±0.00 0.500±0.00 N/A 1.911±0.32 1.965±0.75 2.959±0.00
ENST00000522386 N/A N/A N/A N/A 6.192±0.00 2.952±0.00 N/A N/A 1.387±0.00 2.937±0.00 N/A N/A N/A N/A
ENST00000522783 N/A N/A N/A N/A 0.559±0.00 0.578±0.00 N/A N/A N/A N/A 0.096±0.00 3.316±0.00 1.822±0.49 2.076±0.00
ENST00000523856 N/A 3.343±0.00 N/A 1.064±0.52 0.933±0.00 0.417±0.00 0.141±0.00 N/A 0.048±0.00 0.288±0.00 N/A 1.764±0.59 N/A 0.615±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QE CIL_0006QE_0001 CGP 5:141620876-141641077
CIL_0006QB CIL_0006QB_0001 CGP 5:141636950-141651419
CIL_0002P1 CIL_0002P1_0001 CGP 5:141639302-141682221

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000038524 Fchsd1 FCH and double SH3 domains 1 protein_coding Mus_musculus

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