C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FCH and double SH3 domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522126 FCHSD1-003 ENSG00000197948 9606 - 5:141640982-141651117 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeColonLiverLungOvaryPlacentaTestisENST00000522126
Transcript ID Adipose Colon Liver Lung Ovary Placenta Testis
ENST00000522126 0.866±0.00 0.970±0.00 0.667±0.00 0.500±0.00 1.911±0.32 1.965±0.75 2.959±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QE CIL_0006QE_0001 CGP 5:141620876-141641077
CIL_0006QB CIL_0006QB_0001 CGP 5:141636950-141651419
CIL_0002P1 CIL_0002P1_0001 CGP 5:141639302-141682221

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043437 Fchsd1-001 protein_coding Mus_musculus 0 2211
ENSMUST00000166727 Fchsd1-010 retained_intron Mus_musculus 0 219
ENSMUST00000165643 Fchsd1-002 retained_intron Mus_musculus 6.02558e-44 183
ENSMUST00000166973 Fchsd1-006 retained_intron Mus_musculus 2.00386e-43 182
ENSMUST00000070709 Rell2-001 protein_coding Mus_musculus 4e-26 124
ENSMUST00000177058 Rell2-007 protein_coding Mus_musculus 5e-25 121

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