C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 59
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213186 TRIM59 9606 - 3:160432445-160485773 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309784 TRIM59-001 160435503-160449829 protein_coding
  ENST00000468542 TRIM59-009 160439001-160485773 protein_coding
  ENST00000471155 TRIM59-004 160438841-160449765 protein_coding
  ENST00000471396 TRIM59-005 160438719-160449763 protein_coding
  ENST00000479460 TRIM59-007 160438651-160449725 protein_coding
  ENST00000494486 TRIM59-008 160438849-160449613 protein_coding
  ENST00000496222 TRIM59-006 160438731-160449760 protein_coding
  ENST00000543469 TRIM59-201 160432445-160448937 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000309784ENST00000543469
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000309784 N/A 2.812±0.64 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543469 0.888±0.00 N/A 1.072±0.00 1.295±0.00 1.010±0.00 1.834±0.00 0.729±0.00 1.826±0.00 0.538±0.00 3.290±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004JR CIL_0004JR_0002 CGP 3:160256986-160434962
CIL_0004JQ CIL_0004JQ_0002 CGP 3:160399274-160485773
CIL_0001ZB CIL_0001ZB_0001 CGP 3:160432445-160565588

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0043124 IMP negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079238 TRIM59 tripartite motif containing 59 protein_coding Danio_rerio
ENSMUSG00000034317 Trim59 tripartite motif-containing 59 protein_coding Mus_musculus

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