C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium channel tetramerisation domain containing 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102581 Kctd10-001 ENSMUSG00000001098 10090 - 5:114363567-114380515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102581
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102581 51.478±1.84 43.672±1.98 56.904±5.03 19.376±12.32 36.590±13.73 77.822±6.00 18.845±1.44 26.683±1.50 9.653±2.78 155.303±8.99 5.123±0.77 59.138±18.94 53.452±26.69 23.070±10.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VO CIL_0001VO_0002 CGP 5:114254164-114364576
CIL_0001GP CIL_0001GP_0003 CGP 5:114314941-114380515
CIL_0001GM CIL_0001GM_0003 CGP 5:114363567-114421168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0016567 ISS protein ubiquitination
GO:0031463 ISS Cul3-RING ubiquitin ligase complex
GO:0036038 IDA TCTN-B9D complex
GO:0043161 ISS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051260 IEA protein homooligomerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228495 KCTD10-001 protein_coding Homo_sapiens 0 1465
ENST00000440541 KCTD10-002 nonsense_mediated_decay Homo_sapiens 0 832
ENST00000535546 KCTD10-012 protein_coding Homo_sapiens 0 608
ENST00000535747 KCTD10-010 retained_intron Homo_sapiens 0 580
ENST00000537165 KCTD10-003 nonsense_mediated_decay Homo_sapiens 0 1266
ENST00000538161 KCTD10-005 processed_transcript Homo_sapiens 0 968
ENST00000538377 KCTD10-009 retained_intron Homo_sapiens 0 363
ENST00000540089 KCTD10-007 protein_coding Homo_sapiens 0 832
ENST00000540355 KCTD10-013 protein_coding Homo_sapiens 0 555
ENST00000540402 KCTD10-014 retained_intron Homo_sapiens 0 503
ENST00000540411 KCTD10-004 protein_coding Homo_sapiens 0 667
ENST00000541077 KCTD10-008 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000542262 KCTD10-016 protein_coding Homo_sapiens 0 590
ENST00000542858 KCTD10-015 protein_coding Homo_sapiens 0 580
ENST00000542954 KCTD10-011 protein_coding Homo_sapiens 0 612
ENST00000545759 KCTD10-006 retained_intron Homo_sapiens 0 678

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