C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 114
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000006418 Rnf114 10090 + 2:167492645-167516173 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078050 Rnf114-001 167503089-167516173 protein_coding
  ENSMUST00000109214 Rnf114-002 167492645-167516166 protein_coding
  ENSMUST00000127939 Rnf114-003 167503446-167516164 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078050ENSMUST00000127939
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078050 13.335±1.99 11.709±1.83 12.670±2.13 29.600±4.42 18.045±3.64 20.672±2.86 14.435±0.61 17.705±2.89 16.576±3.07 20.040±1.11 5.243±0.96 17.120±6.97 10.583±6.26 9.162±3.51
ENSMUST00000127939 23.809±3.83 34.251±2.95 20.513±2.84 18.747±5.03 36.696±7.89 26.884±3.54 21.081±8.37 27.449±2.68 17.659±6.67 38.464±3.64 8.144±1.76 26.975±6.08 13.293±5.68 11.175±2.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0002 VISTA 2:167024358-167627099
CIL_00087E CIL_00087E_0002 VISTA 2:167269881-167871243
CIL_0001VJ CIL_0001VJ_0002 CGP 2:167421712-167492887
CIL_00027D CIL_00027D_0002 CGP 2:167481133-167516173
CIL_0006FM CIL_0006FM_0002 CGP 2:167492645-167542814

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000009886 rnf114 ring finger protein 114 protein_coding Danio_rerio
ENSG00000124226 RNF114 ring finger protein 114 protein_coding Homo_sapiens

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