C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015112 Slc25a13 10090 - 6:6041218-6217173 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000015256 Slc25a13-001 6041218-6217118 protein_coding
  ENSMUST00000169197 Slc25a13-002 6041218-6191317 processed_transcript
  ENSMUST00000177698 Slc25a13-007 6109181-6191317 processed_transcript
  ENSMUST00000177805 Slc25a13-008 6041221-6191317 processed_transcript
  ENSMUST00000179756 Slc25a13-009 6109181-6181069 processed_transcript
  ENSMUST00000188130 Slc25a13-201 6041219-6217173 protein_coding
  ENSMUST00000188414 Slc25a13-202 6041219-6217173 protein_coding
  ENSMUST00000189611 Slc25a13-203 6041219-6217173 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015256ENSMUST00000169197ENSMUST00000177698ENSMUST00000177805ENSMUST00000179756ENSMUST00000188414
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015256 0.874±0.73 1.821±0.68 1.226±0.02 1.069±0.05 0.888±0.26 2.147±1.17 20.504±2.51 19.532±5.92 31.364±17.33 1.295±0.00 0.179±0.06 3.926±2.62 8.991±5.59 0.949±0.35
ENSMUST00000169197 N/A N/A N/A 0.185±0.00 N/A N/A N/A N/A N/A N/A 0.037±0.00 1.659±0.52 2.308±1.37 N/A
ENSMUST00000177698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 7.096±0.00 8.278±5.02 0.852±0.00
ENSMUST00000177805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A
ENSMUST00000179756 N/A N/A N/A 0.951±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188414 1.793±0.00 1.539±0.72 N/A 0.729±0.00 N/A 3.597±1.75 4.700±0.00 2.477±0.00 4.848±2.51 1.153±0.17 N/A 2.348±1.13 4.130±2.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AS CIL_0008AS_0002 VISTA 6:5697407-6297858
CIL_0008Z2 CIL_0008Z2_0002 VISTA 6:5705995-6306609
CIL_00053F CIL_00053F_0002 CGP 6:5725639-6217173
CIL_0008Z3 CIL_0008Z3_0002 VISTA 6:5726899-6328252
CIL_0007W8 CIL_0007W8_0002 VISTA 6:5861772-6464755
CIL_00097Z CIL_00097Z_0002 VISTA 6:6016533-6617120
CIL_00078J CIL_00078J_0002 CGP 6:6041218-6578658

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005313 IMP L-glutamate transmembrane transporter activity
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0006754 IEA ATP biosynthetic process
GO:0015183 ISS L-aspartate transmembrane transporter activity
GO:0015810 IMP aspartate transport
GO:0015813 ISS L-glutamate transport
GO:0016021 IEA integral component of membrane
GO:0043490 IMP malate-aspartate shuttle
GO:0045333 IEA cellular respiration
GO:0051592 ISS response to calcium ion
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070172 slc25a13 solute carrier family 25, member 13 protein_coding Danio_rerio
ENSG00000004864 SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13 protein_coding Homo_sapiens

Loading