C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015256 Slc25a13-001 ENSMUSG00000015112 10090 - 6:6041218-6217118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000015256
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000015256 0.874±0.73 1.821±0.68 1.226±0.02 1.069±0.05 0.888±0.26 2.147±1.17 20.504±2.51 19.532±5.92 31.364±17.33 1.295±0.00 0.179±0.06 3.926±2.62 8.991±5.59 0.949±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AS CIL_0008AS_0002 VISTA 6:5697407-6297858
CIL_0008Z2 CIL_0008Z2_0002 VISTA 6:5705995-6306609
CIL_00053F CIL_00053F_0002 CGP 6:5725639-6217173
CIL_0008Z3 CIL_0008Z3_0002 VISTA 6:5726899-6328252
CIL_0007W8 CIL_0007W8_0002 VISTA 6:5861772-6464755
CIL_00097Z CIL_00097Z_0002 VISTA 6:6016533-6617120
CIL_00078J CIL_00078J_0002 CGP 6:6041218-6578658

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005313 IMP L-glutamate transmembrane transporter activity
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane
GO:0015183 ISS L-aspartate transmembrane transporter activity
GO:0015810 IMP aspartate transport
GO:0015813 ISS L-glutamate transport
GO:0016021 IEA integral component of membrane
GO:0043490 IMP malate-aspartate shuttle
GO:0051592 ISS response to calcium ion
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265631 SLC25A13-001 protein_coding Homo_sapiens 0 2704
ENST00000416240 SLC25A13-201 protein_coding Homo_sapiens 0 2723
ENST00000472162 SLC25A13-005 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000484495 SLC25A13-003 processed_transcript Homo_sapiens 0 544
ENST00000490072 SLC25A13-002 processed_transcript Homo_sapiens 0 475
ENST00000492869 SLC25A13-006 processed_transcript Homo_sapiens 0 394
ENST00000494085 SLC25A13-007 processed_transcript Homo_sapiens 0 296
ENST00000538551 RP11-627K11.3-001 processed_pseudogene Homo_sapiens 0 272

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