C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein kinase D3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118991 Prkd3-005 ENSMUSG00000024070 10090 - 17:78971555-78985448 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENSMUST00000118991
Transcript ID Liver
ENSMUST00000118991 18.473±2.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085G CIL_00085G_0002 VISTA 17:78844758-79446183
CIL_0008VK CIL_0008VK_0002 VISTA 17:78923077-79528513
CIL_0002IK CIL_0002IK_0002 CGP 17:78937135-79020816
CIL_0002IN CIL_0002IN_0002 CGP 17:78949405-79090243

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004697 IEA protein kinase C activity
GO:0005524 IEA ATP binding
GO:0006468 IEA protein phosphorylation
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110322 PRKD1-201 protein_coding Danio_rerio 2e-20 104
ENSDART00000153937 PRKD1-001 protein_coding Danio_rerio 2e-20 104
ENST00000234179 PRKD3-201 protein_coding Homo_sapiens 0 1061
ENST00000379066 PRKD3-001 protein_coding Homo_sapiens 0 1061
ENST00000443187 PRKD3-004 protein_coding Homo_sapiens 0 747
ENST00000464552 PRKD3-005 retained_intron Homo_sapiens 0 217
ENST00000475912 PRKD3-006 retained_intron Homo_sapiens 0 699
ENST00000494667 PRKD3-002 retained_intron Homo_sapiens 0 1061

Loading