C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prothymosin alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026238 Ptma 10090 + 1:86526726-86530712 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045897 Ptma-001 86526726-86530712 protein_coding
  ENSMUST00000186255 Ptma-005 86526736-86530371 protein_coding
  ENSMUST00000186932 Ptma-004 86526741-86529745 processed_transcript
  ENSMUST00000188533 Ptma-006 86526807-86530209 protein_coding
  ENSMUST00000188699 Ptma-003 86526737-86529527 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045897ENSMUST00000186255ENSMUST00000186932ENSMUST00000188533
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045897 177.464±110.53 266.963±42.93 447.005±23.43 582.882±376.47 148.722±59.38 186.215±41.38 39.725±5.95 159.275±14.21 535.461±608.00 208.762±0.93 28.223±4.40 465.811±174.20 439.963±263.40 34.169±9.98
ENSMUST00000186255 N/A N/A N/A 67.866±0.00 N/A N/A N/A N/A N/A N/A N/A 384.717±0.00 255.696±135.22 27.813±0.00
ENSMUST00000186932 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 224.449±0.00
ENSMUST00000188533 N/A N/A N/A N/A N/A N/A N/A N/A 165.892±0.00 N/A N/A N/A N/A 29.484±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000899 CIL_000899_0002 VISTA 1:86187174-86788752
CIL_0007WD CIL_0007WD_0002 VISTA 1:86187834-86792789
CIL_0007FJ CIL_0007FJ_0002 CGP 1:86426329-86530712
CIL_0007FM CIL_0007FM_0002 CGP 1:86526726-86582629

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0042393 IDA histone binding
GO:0043486 IDA histone exchange

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000187514 PTMA prothymosin, alpha protein_coding Homo_sapiens

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