C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: prothymosin, alpha
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187514 PTMA 9606 + 2:231706895-231713541 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341369 PTMA-002 231708516-231713536 protein_coding
  ENST00000409115 PTMA-001 231708509-231713541 protein_coding
  ENST00000409321 PTMA-012 231707684-231713108 protein_coding
  ENST00000409683 PTMA-007 231708536-231713289 protein_coding
  ENST00000410064 PTMA-004 231709781-231712856 protein_coding
  ENST00000412128 PTMA-008 231710427-231713268 protein_coding
  ENST00000440384 PTMA-009 231710491-231711383 protein_coding
  ENST00000448874 PTMA-011 231707630-231713465 nonsense_mediated_decay
  ENST00000466801 PTMA-013 231706895-231713013 processed_transcript
  ENST00000467816 PTMA-010 231711131-231711978 retained_intron
  ENST00000468027 PTMA-006 231708530-231712675 retained_intron
  ENST00000481928 PTMA-003 231708530-231713506 retained_intron
  ENST00000612829 PTMA-201 231710179-231713539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341369ENST00000409115ENST00000409321ENST00000412128ENST00000448874ENST00000468027
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341369 80.361±0.00 180.379±0.00 N/A 39.649±0.00 53.952±0.00 68.159±48.25 10.620±0.00 28.173±17.18 26.361±3.30 113.411±0.00 11.373±0.00 56.454±27.40 N/A 37.816±21.83
ENST00000409115 122.209±0.00 N/A 46.702±0.00 67.536±0.00 78.213±33.72 83.663±11.37 13.461±3.74 57.024±0.00 121.342±0.00 92.846±0.00 11.633±2.63 290.321±203.68 473.141±139.84 59.044±13.44
ENST00000409321 327.208±0.00 685.156±0.00 N/A 193.071±0.00 233.502±0.00 476.133±0.00 26.189±0.00 159.180±0.00 71.081±0.00 445.599±0.00 25.577±0.00 515.543±0.00 N/A 220.026±0.00
ENST00000412128 144.089±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.086±0.00
ENST00000448874 N/A 157.790±0.00 N/A 107.436±0.00 77.497±0.00 187.846±0.00 36.026±0.00 215.827±0.00 68.344±0.00 292.331±0.00 23.597±0.00 54.392±0.00 N/A 135.871±0.00
ENST00000468027 N/A N/A N/A 47.582±0.00 N/A N/A 11.134±0.00 N/A N/A N/A N/A 54.892±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000899 CIL_000899_0001 VISTA 2:231361987-231963495
CIL_0007WD CIL_0007WD_0001 VISTA 2:231362545-231967398
CIL_0007FJ CIL_0007FJ_0001 CGP 2:231592901-231713541
CIL_0007FM CIL_0007FM_0001 CGP 2:231706895-231786272

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 TAS transcription, DNA-templated
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000026238 Ptma prothymosin alpha protein_coding Mus_musculus
ENSMUSG00000094790 Gm6625 predicted gene 6625 protein_coding Mus_musculus

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