C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoenolpyruvate carboxykinase 1, cytosolic
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027513 Pck1 10090 + 2:173153048-173159273 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029017 Pck1-001 173153048-173159273 protein_coding
  ENSMUST00000136885 Pck1-003 173153082-173159271 retained_intron
  ENSMUST00000150629 Pck1-004 173153073-173154809 processed_transcript
  ENSMUST00000151269 Pck1-002 173153073-173154459 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029017ENSMUST00000136885
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029017 117.640±70.66 71.693±25.03 2.281±0.05 0.008±0.01 54.968±15.10 35.908±7.91 10.513±6.32 369.938±44.50 115.043±133.22 6.640±2.44 1.264±1.26 9.022±12.01 1.022±1.79 0.135±0.04
ENSMUST00000136885 N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A 0.145±0.15 N/A 0.604±0.00 N/A N/A 0.063±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YW CIL_0008YW_0002 VISTA 2:172561962-173164167
CIL_0008TD CIL_0008TD_0002 VISTA 2:172564603-173165839
CIL_0008HJ CIL_0008HJ_0002 VISTA 2:172734798-173336840
CIL_0008BA CIL_0008BA_0002 VISTA 2:172748983-173356071
CIL_0005JC CIL_0005JC_0002 CGP 2:173093609-173159273
CIL_0005K4 CIL_0005K4_0002 CGP 2:173153048-173218923

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004611 IMP phosphoenolpyruvate carboxykinase activity
GO:0004613 IEA phosphoenolpyruvate carboxykinase (GTP) activity
GO:0005737 IEA cytoplasm
GO:0006006 IEA glucose metabolic process
GO:0006094 IEA gluconeogenesis
GO:0006107 IEA oxaloacetate metabolic process
GO:0006475 ISS internal protein amino acid acetylation
GO:0006629 IMP lipid metabolic process
GO:0014823 IEA response to activity
GO:0019003 IEA GDP binding
GO:0030145 IEA manganese ion binding
GO:0031406 IEA carboxylic acid binding
GO:0032868 IEA response to insulin
GO:0042593 IEA glucose homeostasis
GO:0046327 IMP glycerol biosynthetic process from pyruvate
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000013522 pck1 phosphoenolpyruvate carboxykinase 1 (soluble) protein_coding Danio_rerio
ENSG00000124253 PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) protein_coding Homo_sapiens

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