C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoenolpyruvate carboxykinase 1, cytosolic
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029017 Pck1-001 ENSMUSG00000027513 10090 + 2:173153048-173159273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029017
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029017 117.640±70.66 71.693±25.03 2.281±0.05 0.008±0.01 54.968±15.10 35.908±7.91 10.513±6.32 369.938±44.50 115.043±133.22 6.640±2.44 1.264±1.26 9.022±12.01 1.022±1.79 0.135±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YW CIL_0008YW_0002 VISTA 2:172561962-173164167
CIL_0008TD CIL_0008TD_0002 VISTA 2:172564603-173165839
CIL_0008HJ CIL_0008HJ_0002 VISTA 2:172734798-173336840
CIL_0008BA CIL_0008BA_0002 VISTA 2:172748983-173356071
CIL_0005JC CIL_0005JC_0002 CGP 2:173093609-173159273
CIL_0005K4 CIL_0005K4_0002 CGP 2:173153048-173218923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004611 IMP phosphoenolpyruvate carboxykinase activity
GO:0004613 IEA phosphoenolpyruvate carboxykinase (GTP) activity
GO:0005737 IEA cytoplasm
GO:0006006 IEA glucose metabolic process
GO:0006094 IEA gluconeogenesis
GO:0006107 IEA oxaloacetate metabolic process
GO:0006475 ISS internal protein amino acid acetylation
GO:0006629 IMP lipid metabolic process
GO:0014823 IEA response to activity
GO:0019003 IEA GDP binding
GO:0030145 IEA manganese ion binding
GO:0031406 IEA carboxylic acid binding
GO:0032868 IEA response to insulin
GO:0042593 IEA glucose homeostasis
GO:0046327 IMP glycerol biosynthetic process from pyruvate
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000008752 pck1-001 protein_coding Danio_rerio 0 682
ENST00000319441 PCK1-001 protein_coding Homo_sapiens 0 1956
ENST00000467047 PCK1-002 retained_intron Homo_sapiens 0 614
ENST00000485958 PCK1-006 retained_intron Homo_sapiens 0 542

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