C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005JC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124092-ENSG00000124253 CGP 9606 20:57495966-57568112
GeneTranscriptPositionBiotype
ENSG00000124092 (CTCFL)
CCCTC-binding factor (zinc finger protein)-like 		ENST00000243914 (CTCFL-001) 57497168-57525209 protein_coding
ENST00000371196 (CTCFL-003) 57497168-57525579 protein_coding
ENST00000422109 (CTCFL-018) 57499554-57524867 nonsense_mediated_decay
ENST00000422869 (CTCFL-016) 57506742-57525652 protein_coding
ENST00000423479 (CTCFL-020) 57495966-57525107 protein_coding
ENST00000426658 (CTCFL-017) 57499554-57524867 nonsense_mediated_decay
ENST00000429804 (CTCFL-005) 57497164-57525652 protein_coding
ENST00000432255 (CTCFL-006) 57506742-57524867 protein_coding
ENST00000433949 (CTCFL-021) 57499554-57525107 protein_coding
ENST00000481655 (CTCFL-012) 57518495-57525652 protein_coding
ENST00000502686 (CTCFL-022) 57499554-57525107 protein_coding
ENST00000539382 (CTCFL-013) 57506742-57525107 protein_coding
ENST00000607923 (CTCFL-010) 57514592-57524867 retained_intron
ENST00000608108 (CTCFL-009) 57514592-57525107 retained_intron
ENST00000608158 (CTCFL-011) 57518495-57524867 protein_coding
ENST00000608263 (CTCFL-019) 57497164-57524867 protein_coding
ENST00000608425 (CTCFL-014) 57506742-57525652 protein_coding
ENST00000608440 (CTCFL-023) 57499554-57524257 protein_coding
ENST00000608720 (CTCFL-007) 57514592-57524867 nonsense_mediated_decay
ENST00000608858 (CTCFL-008) 57514592-57525107 processed_transcript
ENST00000608903 (CTCFL-015) 57506742-57525107 protein_coding
ENST00000609232 (CTCFL-004) 57497164-57525652 protein_coding
ENSG00000124253 (PCK1)
phosphoenolpyruvate carboxykinase 1 (soluble) 		ENST00000319441 (PCK1-001) 57561080-57568112 protein_coding
ENST00000467047 (PCK1-002) 57561080-57566367 retained_intron
ENST00000470051 (PCK1-005) 57562834-57563591 retained_intron
ENST00000475833 (PCK1-003) 57561103-57562307 retained_intron
ENST00000485958 (PCK1-006) 57564084-57565392 retained_intron
ENST00000498194 (PCK1-004) 57562348-57563607 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0005JC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070495-ENSMUSG00000027513 CGP 10090 2:173093609-173159273
GeneTranscriptPositionBiotype
ENSMUSG00000027513 (Pck1)
phosphoenolpyruvate carboxykinase 1, cytosolic 		ENSMUST00000029017 (Pck1-001) 173153048-173159273 protein_coding
ENSMUST00000136885 (Pck1-003) 173153082-173159271 retained_intron
ENSMUST00000150629 (Pck1-004) 173153073-173154809 processed_transcript
ENSMUST00000151269 (Pck1-002) 173153073-173154459 retained_intron
ENSMUSG00000070495 (Ctcfl)
CCCTC-binding factor (zinc finger protein)-like 		ENSMUST00000094287 (Ctcfl-001) 173093609-173119525 protein_coding
ENSMUST00000179693 (Ctcfl-201) 173093609-173119525 protein_coding
ENSMUSG00000087382 (Ctcflos)
CCCTC-binding factor (zinc finger protein)-like, opposite strand 		ENSMUST00000142165 (Ctcflos-002) 173119738-173129310 antisense
ENSMUST00000142207 (Ctcflos-003) 173110835-173132270 antisense
ENSMUST00000144256 (Ctcflos-001) 173110818-173114709 antisense
ENSMUST00000153523 (Ctcflos-004) 173124749-173133204 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005JC_0001ENSG00000124092ENST00000243914ENST00000371196ENST00000422109ENST00000422869ENST00000423479ENST00000426658ENST00000429804ENST00000432255ENST00000433949ENST00000481655ENST00000502686ENST00000539382ENST00000607923ENST00000608108ENST00000608158ENST00000608263ENST00000608425ENST00000608440ENST00000608720ENST00000608858ENST00000608903ENST00000609232ENSG00000124253ENST00000319441ENST00000467047ENST00000470051ENST00000475833ENST00000485958ENST00000498194CIL_0005JC_0002ENSMUSG00000027513ENSMUST00000029017ENSMUST00000136885ENSMUST00000150629ENSMUST00000151269ENSMUSG00000070495ENSMUST00000094287ENSMUST00000179693ENSMUSG00000087382ENSMUST00000142165ENSMUST00000142207ENSMUST00000144256ENSMUST00000153523
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005JC_0001ENSG00000124092ENST00000243914ENST00000371196ENST00000423479ENST00000426658ENST00000429804ENST00000502686ENST00000608108ENST00000608903ENSG00000124253ENST00000319441ENST00000467047ENST00000470051ENST00000475833ENST00000485958ENST00000498194CIL_0005JC_0002ENSMUSG00000027513ENSMUST00000029017ENSMUST00000136885ENSMUSG00000070495ENSMUST00000094287ENSMUST00000179693ENSMUSG00000087382ENSMUST00000142165ENSMUST00000142207ENSMUST00000144256ENSMUST00000153523
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000124092 ENST00000243914 N/A N/A N/A N/A N/A N/A N/A N/A 0.005±0.00 N/A 0.073±0.00 N/A 0.037±0.01 5.408±4.33
ENST00000371196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.02 N/A
ENST00000422109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000422869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423479 0.081±0.00 N/A N/A 0.055±0.00 0.081±0.00 0.087±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.007±0.00 N/A N/A
ENST00000429804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.164±0.00
ENST00000432255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502686 N/A N/A N/A N/A 0.053±0.00 N/A 0.039±0.00 N/A 0.080±0.04 N/A N/A N/A N/A N/A
ENST00000539382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000607923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608108 0.254±0.00 N/A N/A 0.165±0.00 N/A 0.038±0.00 N/A 0.263±0.00 0.018±0.00 0.100±0.00 N/A 0.064±0.00 N/A N/A
ENST00000608158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608263 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608903 0.098±0.00 N/A N/A 0.061±0.00 0.106±0.00 N/A 0.030±0.00 N/A 0.014±0.00 N/A N/A 0.056±0.00 N/A N/A
ENST00000609232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000124253 ENST00000319441 N/A 0.097±0.00 27.480±0.00 0.084±0.01 2.165±0.00 10.707±0.00 0.189±0.00 26.186±0.00 2.644±0.00 0.326±0.16 0.197±0.09 0.270±0.15 0.107±0.06 0.271±0.02
ENST00000467047 N/A N/A 9.349±0.00 N/A 0.480±0.00 6.421±0.00 0.110±0.09 8.731±0.00 1.058±0.00 0.176±0.00 N/A 0.135±0.00 N/A N/A
ENST00000470051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.150±0.00 N/A N/A
ENST00000475833 N/A N/A N/A N/A N/A N/A N/A N/A 2.553±0.00 0.470±0.00 N/A N/A N/A N/A
ENST00000485958 N/A N/A N/A N/A N/A N/A 0.314±0.00 N/A N/A N/A 0.178±0.00 0.413±0.00 0.196±0.00 N/A
ENST00000498194 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027513 ENSMUST00000029017 117.640±70.66 71.693±25.03 2.281±0.05 0.008±0.01 54.968±15.10 35.908±7.91 10.513±6.32 369.938±44.50 115.043±133.22 6.640±2.44 1.264±1.26 9.022±12.01 1.022±1.79 0.135±0.04
ENSMUST00000136885 N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A 0.145±0.15 N/A 0.604±0.00 N/A N/A 0.063±0.00
ENSMUST00000150629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000070495 ENSMUST00000094287 N/A N/A 0.162±0.00 0.348±0.20 N/A 0.276±0.00 0.045±0.00 N/A 0.129±0.11 N/A 0.085±0.05 0.248±0.17 0.220±0.19 0.419±0.14
ENSMUST00000179693 0.761±0.12 N/A N/A 0.019±0.00 N/A 0.209±0.04 0.088±0.03 0.122±0.02 0.434±0.15 0.132±0.02 0.030±0.00 0.154±0.05 0.041±0.00 0.485±0.01
ENSMUSG00000087382 ENSMUST00000142165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.737±0.00
ENSMUST00000142207 5.481±4.06 N/A N/A N/A N/A 0.389±0.00 N/A 0.285±0.07 N/A 0.302±0.00 0.267±0.06 0.666±0.20 N/A N/A
ENSMUST00000144256 1.184±0.00 N/A N/A N/A N/A 0.271±0.00 0.291±0.09 0.271±0.00 N/A N/A 0.097±0.00 0.392±0.10 N/A 0.617±0.00
ENSMUST00000153523 1.819±0.00 0.537±0.01 0.206±0.00 N/A 2.109±0.75 0.098±0.04 0.085±0.02 0.162±0.08 0.718±0.77 0.170±0.07 0.078±0.05 0.275±0.14 0.107±0.10 0.504±0.21

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