C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alpha-kinase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028028 Alpk1 10090 - 3:127670399-127780527 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029662 Alpk1-001 127670932-127780513 protein_coding
  ENSMUST00000159720 Alpk1-005 127679520-127686340 protein_coding
  ENSMUST00000160586 Alpk1-003 127670399-127780527 retained_intron
  ENSMUST00000161239 Alpk1-004 127724285-127780513 protein_coding
  ENSMUST00000162859 Alpk1-002 127754850-127780490 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029662ENSMUST00000159720ENSMUST00000160586ENSMUST00000161239
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029662 N/A 0.514±0.25 2.085±0.00 0.255±0.08 0.547±0.21 1.516±0.43 N/A 0.296±0.13 0.072±0.02 0.769±0.00 0.248±0.00 0.690±0.39 0.237±0.08 0.493±0.18
ENSMUST00000159720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.717±0.00 N/A N/A
ENSMUST00000160586 0.867±0.06 0.485±0.22 4.455±1.65 0.365±0.14 0.949±0.51 1.435±0.61 0.391±0.18 0.248±0.10 0.207±0.12 0.872±0.07 0.172±0.06 0.918±0.30 0.199±0.13 0.597±0.11
ENSMUST00000161239 N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00 N/A N/A N/A N/A 1.229±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WR CIL_0008WR_0002 VISTA 3:127326841-127927904
CIL_00080F CIL_00080F_0002 VISTA 3:127613726-128215301
CIL_0007P9 CIL_0007P9_0002 UCNEbase 3:127625906-129219414

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0006468 IEA protein phosphorylation
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059741 ALPK1 alpha-kinase 1 protein_coding Danio_rerio
ENSG00000073331 ALPK1 alpha-kinase 1 protein_coding Homo_sapiens

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