C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115195 Dnajc2-006 ENSMUSG00000029014 10090 - 5:21757282-21785216 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryPlacentaTestisENSMUST00000115195
Transcript ID Liver Muscle Ovary Placenta Testis
ENSMUST00000115195 1.351±0.23 1.168±0.00 7.348±0.90 3.797±0.00 87.537±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0001RL CIL_0001RL_0003 CGP 5:21737141-21785251
CIL_0005C8 CIL_0005C8_0002 CGP 5:21757267-21803787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0006260 IMP DNA replication
GO:2000279 IMP negative regulation of DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249270 DNAJC2-002 protein_coding Homo_sapiens 0 1290
ENST00000379257 DNAJC2-006 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000379263 DNAJC2-001 protein_coding Homo_sapiens 0 2239
ENST00000404462 RP1-217P22.2-001 processed_pseudogene Homo_sapiens 0 372
ENST00000412522 DNAJC2-003 protein_coding Homo_sapiens 0 250
ENST00000426036 DNAJC2-011 protein_coding Homo_sapiens 0 582
ENST00000454277 DNAJC2-010 protein_coding Homo_sapiens 0 1020
ENST00000464253 DNAJC2-004 retained_intron Homo_sapiens 0 1271
ENST00000475065 DNAJC2-005 retained_intron Homo_sapiens 0 1317
ENST00000483637 DNAJC2-008 retained_intron Homo_sapiens 0 296

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