C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030771 Dnajc2-001 ENSMUSG00000029014 10090 - 5:21757267-21785251 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030771
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030771 3.630±3.09 5.869±0.02 13.537±3.23 1.886±1.02 2.078±0.88 4.185±2.02 9.119±5.51 4.261±4.55 7.851±0.52 17.303±12.19 31.705±32.12 52.710±21.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0001RL CIL_0001RL_0003 CGP 5:21737141-21785251
CIL_0005C8 CIL_0005C8_0002 CGP 5:21757267-21803787

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003682 ISS chromatin binding
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005737 IEA cytoplasm
GO:0005829 ISS cytosol
GO:0006260 IMP DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0030308 IEA negative regulation of cell growth
GO:0030544 IEA Hsp70 protein binding
GO:0031965 IEA nuclear membrane
GO:0042393 ISS histone binding
GO:0043130 ISS ubiquitin binding
GO:0044822 IEA poly(A) RNA binding
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:2000279 IMP negative regulation of DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249270 DNAJC2-002 protein_coding Homo_sapiens 0 1526
ENST00000379257 DNAJC2-006 nonsense_mediated_decay Homo_sapiens 0 678
ENST00000379263 DNAJC2-001 protein_coding Homo_sapiens 0 2532
ENST00000404462 RP1-217P22.2-001 processed_pseudogene Homo_sapiens 0 372
ENST00000412522 DNAJC2-003 protein_coding Homo_sapiens 0 542
ENST00000426036 DNAJC2-011 protein_coding Homo_sapiens 0 773
ENST00000454277 DNAJC2-010 protein_coding Homo_sapiens 0 881
ENST00000464253 DNAJC2-004 retained_intron Homo_sapiens 0 1271
ENST00000475065 DNAJC2-005 retained_intron Homo_sapiens 0 1319
ENST00000483637 DNAJC2-008 retained_intron Homo_sapiens 0 296

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