C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coatomer protein complex, subunit gamma 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030058 Copg1 10090 + 6:87887814-87913595 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049966 Copg1-003 87887928-87890759 protein_coding
  ENSMUST00000113607 Copg1-001 87887814-87913595 protein_coding
  ENSMUST00000127614 Copg1-008 87908772-87910054 processed_transcript
  ENSMUST00000132938 Copg1-007 87897803-87902766 retained_intron
  ENSMUST00000137717 Copg1-002 87887957-87894962 retained_intron
  ENSMUST00000149409 Copg1-006 87895456-87904867 retained_intron
  ENSMUST00000149907 Copg1-004 87896006-87912530 retained_intron
  ENSMUST00000152175 Copg1-005 87895116-87896102 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049966ENSMUST00000113607ENSMUST00000149409
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049966 N/A N/A N/A 20.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113607 28.638±11.33 18.980±6.00 18.038±5.68 19.242±6.56 10.333±2.90 26.382±3.27 9.751±1.31 13.648±0.75 12.857±3.55 22.222±1.35 9.554±0.57 21.978±10.41 39.421±15.96 6.719±1.90
ENSMUST00000149409 N/A N/A N/A 56.957±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 47.241±18.80 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000312 CIL_000312_0002 CGP 6:87842615-87913595
CIL_00030Z CIL_00030Z_0002 CGP 6:87887814-87936629

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005198 IEA structural molecule activity
GO:0005515 IEA protein binding
GO:0006886 IEA intracellular protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030126 IEA COPI vesicle coat
GO:0051683 IEA establishment of Golgi localization
GO:0072384 IEA organelle transport along microtubule

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000181789 COPG1 coatomer protein complex, subunit gamma 1 protein_coding Homo_sapiens

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