C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coatomer protein complex, subunit gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149409 Copg1-006 ENSMUSG00000030058 10090 + 6:87895456-87904867 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000149409
Transcript ID Brain Placenta
ENSMUST00000149409 56.957±0.00 47.241±18.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000312 CIL_000312_0002 CGP 6:87842615-87913595
CIL_00030Z CIL_00030Z_0002 CGP 6:87887814-87936629

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314797 COPG1-001 protein_coding Homo_sapiens 0 894
ENST00000330992 COPG2-003 protein_coding Homo_sapiens 0 357
ENST00000425248 COPG2-001 protein_coding Homo_sapiens 0 357
ENST00000504547 COPG1-015 retained_intron Homo_sapiens 0 494
ENST00000515725 COPG1-002 retained_intron Homo_sapiens 0 894
ENST00000617523 COPG2-002 retained_intron Homo_sapiens 0 357

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