C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: amyloid beta (A4) precursor protein-binding, family A, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030519 Apba2 10090 + 7:64501706-64753870 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032732 Apba2-001 64501706-64753870 protein_coding
  ENSMUST00000096173 Apba2-003 64743839-64753366 protein_coding
  ENSMUST00000107507 Apba2-002 64635031-64753858 protein_coding
  ENSMUST00000137732 Apba2-005 64502138-64695371 protein_coding
  ENSMUST00000138829 Apba2-004 64501949-64695307 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032732ENSMUST00000096173ENSMUST00000107507ENSMUST00000137732ENSMUST00000138829
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032732 0.160±0.00 N/A 0.194±0.03 33.682±17.69 0.043±0.00 0.521±0.15 N/A N/A 0.086±0.00 0.138±0.00 N/A 0.248±0.03 0.007±0.00 0.068±0.01
ENSMUST00000096173 0.213±0.00 0.192±0.10 N/A N/A 0.046±0.00 0.605±0.00 0.153±0.00 0.059±0.02 0.088±0.05 N/A 0.075±0.01 N/A N/A 0.185±0.00
ENSMUST00000107507 0.040±0.02 0.129±0.07 0.590±0.00 10.401±2.42 0.054±0.02 0.488±0.04 0.124±0.05 0.049±0.02 0.041±0.03 0.239±0.00 0.017±0.00 0.990±0.35 0.044±0.04 0.136±0.16
ENSMUST00000137732 0.337±0.03 0.229±0.10 N/A N/A 0.167±0.04 1.002±0.25 0.412±0.21 0.157±0.05 N/A 0.653±0.01 0.226±0.00 2.369±0.85 0.117±0.04 N/A
ENSMUST00000138829 N/A 0.204±0.03 N/A N/A 0.124±0.02 0.649±0.00 N/A 0.092±0.02 N/A 0.332±0.00 N/A 0.668±0.01 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007CR CIL_0007CR_0002 CGP 7:64392645-64753870
CIL_0006HE CIL_0006HE_0002 CGP 7:64501706-65156570

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001540 IEA beta-amyloid binding
GO:0001701 IGI in utero embryonic development
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0007268 IGI synaptic transmission
GO:0007626 IGI locomotory behavior
GO:0010468 IGI regulation of gene expression
GO:0015031 IEA protein transport
GO:0035264 IGI multicellular organism growth

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060639 apba2b amyloid beta (A4) precursor protein-binding, family A, member 2b protein_coding Danio_rerio
ENSDARG00000063314 apba2a amyloid beta (A4) precursor protein-binding, family A, member 2a protein_coding Danio_rerio
ENSG00000034053 APBA2 amyloid beta (A4) precursor protein-binding, family A, member 2 protein_coding Homo_sapiens

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