C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032849 Abcc4 10090 - 14:118482692-118706219 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036554 Abcc4-201 118482692-118706219 protein_coding
  ENSMUST00000166646 Abcc4-202 118482692-118706219 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036554ENSMUST00000166646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036554 4.024±1.88 3.168±0.70 16.431±6.98 0.494±0.04 2.254±0.42 2.943±0.21 2.231±0.30 12.108±3.75 0.820±0.40 3.079±0.58 2.119±0.57 3.368±1.09 3.547±3.19 0.411±0.15
ENSMUST00000166646 0.627±0.00 N/A N/A 0.949±0.00 N/A N/A N/A N/A 0.202±0.00 N/A 0.914±0.10 2.467±0.95 0.670±0.22 0.543±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000890 CIL_000890_0002 VISTA 14:117893836-118495430
CIL_0008KC CIL_0008KC_0002 VISTA 14:117929617-118531411
CIL_0008M7 CIL_0008M7_0002 VISTA 14:118135485-118736834
CIL_0008LV CIL_0008LV_0002 VISTA 14:118135538-118736865
CIL_0007KH CIL_0007KH_0002 UCNEbase 14:118194320-118485392
CIL_0002F4 CIL_0002F4_0002 CGP 14:118482692-118875489

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006855 TAS drug transmembrane transport
GO:0010033 IEA response to organic substance
GO:0010243 IEA response to organonitrogen compound
GO:0014070 IEA response to organic cyclic compound
GO:0015238 TAS drug transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0031088 IEA platelet dense granule membrane
GO:0042493 IEA response to drug
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0048661 IEA positive regulation of smooth muscle cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058953 abcc4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein_coding Danio_rerio
ENSG00000125257 ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 protein_coding Homo_sapiens

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