C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166646 Abcc4-202 ENSMUSG00000032849 10090 - 14:118482692-118706219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainLiverMuscleOvaryPlacentaTestisENSMUST00000166646
Transcript ID Adipose Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000166646 0.627±0.00 0.949±0.00 0.202±0.00 0.914±0.10 2.467±0.95 0.670±0.22 0.543±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000890 CIL_000890_0002 VISTA 14:117893836-118495430
CIL_0008KC CIL_0008KC_0002 VISTA 14:117929617-118531411
CIL_0008M7 CIL_0008M7_0002 VISTA 14:118135485-118736834
CIL_0008LV CIL_0008LV_0002 VISTA 14:118135538-118736865
CIL_0007KH CIL_0007KH_0002 UCNEbase 14:118194320-118485392
CIL_0002F4 CIL_0002F4_0002 CGP 14:118482692-118875489

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0006855 TAS drug transmembrane transport
GO:0015238 TAS drug transmembrane transporter activity
GO:0016021 IEA integral component of membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376887 ABCC4-001 protein_coding Homo_sapiens 0 2929
ENST00000536256 ABCC4-006 protein_coding Homo_sapiens 0 1820

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