C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036554 Abcc4-201 ENSMUSG00000032849 10090 - 14:118482692-118706219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036554
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036554 4.024±1.88 3.168±0.70 16.431±6.98 0.494±0.04 2.254±0.42 2.943±0.21 2.231±0.30 12.108±3.75 0.820±0.40 3.079±0.58 2.119±0.57 3.368±1.09 3.547±3.19 0.411±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000890 CIL_000890_0002 VISTA 14:117893836-118495430
CIL_0008KC CIL_0008KC_0002 VISTA 14:117929617-118531411
CIL_0008M7 CIL_0008M7_0002 VISTA 14:118135485-118736834
CIL_0008LV CIL_0008LV_0002 VISTA 14:118135538-118736865
CIL_0007KH CIL_0007KH_0002 UCNEbase 14:118194320-118485392
CIL_0002F4 CIL_0002F4_0002 CGP 14:118482692-118875489

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005886 IEA plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0006855 TAS drug transmembrane transport
GO:0010033 IEA response to organic substance
GO:0010243 IEA response to organonitrogen compound
GO:0014070 IEA response to organic cyclic compound
GO:0015238 TAS drug transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016323 IEA basolateral plasma membrane
GO:0031088 IEA platelet dense granule membrane
GO:0042493 IEA response to drug
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0048661 IEA positive regulation of smooth muscle cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000376887 ABCC4-001 protein_coding Homo_sapiens 0 3358
ENST00000536256 ABCC4-006 protein_coding Homo_sapiens 0 1513

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