C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140570 Ctdspl2-002 ENSMUSG00000033411 10090 + 2:121956480-122012615 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000140570
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000140570 1.317±0.35 0.694±0.00 2.271±1.53 1.957±0.76 0.435±0.00 1.701±0.96 0.962±0.39 1.410±0.00 0.312±0.00 4.952±2.12 1.949±0.49 1.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000686 CIL_000686_0002 CGP 2:121956001-122056598

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260327 CTDSPL2-001 protein_coding Homo_sapiens 0 5147
ENST00000412509 RP11-402K9.1-001 processed_pseudogene Homo_sapiens 0 952
ENST00000558373 CTDSPL2-003 protein_coding Homo_sapiens 0 3969
ENST00000558791 CTDSPL2-010 protein_coding Homo_sapiens 0 725
ENST00000558966 CTDSPL2-002 protein_coding Homo_sapiens 0 2553
ENST00000558968 CTDSPL2-006 protein_coding Homo_sapiens 0 403
ENST00000559175 CTDSPL2-004 retained_intron Homo_sapiens 0 2828
ENST00000559738 CTDSPL2-009 processed_transcript Homo_sapiens 0 560
ENST00000559793 CTDSPL2-005 protein_coding Homo_sapiens 0 514
ENST00000560620 CTDSPL2-008 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000560834 CTDSPL2-011 processed_transcript Homo_sapiens 0 497
ENST00000561189 CTDSPL2-007 processed_transcript Homo_sapiens 0 409

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