C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156988 Eef1a1-003 ENSMUSG00000037742 10090 - 9:78479915-78480841 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000156988
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000156988 763.187±0.00 2882.150±0.00 1629.160±560.20 697.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0002 CGP 9:78448208-78489151
CIL_0006PR CIL_0006PR_0002 CGP 9:78478449-78588041

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006184 IEA GTP catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 527
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 527
ENST00000309268 EEF1A1-009 protein_coding Homo_sapiens 0 811
ENST00000316292 EEF1A1-001 protein_coding Homo_sapiens 0 832
ENST00000325349 EEF1A1P16-001 processed_pseudogene Homo_sapiens 0 654
ENST00000331523 EEF1A1-004 protein_coding Homo_sapiens 0 811
ENST00000356303 EEF1A1-015 protein_coding Homo_sapiens 0 643
ENST00000359165 EEF1A1P4-001 processed_pseudogene Homo_sapiens 0 628
ENST00000401075 RP11-439L8.2-001 processed_pseudogene Homo_sapiens 0 412
ENST00000415278 EEF1A1P11-001 processed_pseudogene Homo_sapiens 0 730
ENST00000416082 EEF1A1P29-001 processed_pseudogene Homo_sapiens 0 364
ENST00000417549 EEF1A1P3-001 processed_pseudogene Homo_sapiens 0 636
ENST00000419025 EEF1A1P8-001 processed_pseudogene Homo_sapiens 0 669
ENST00000419888 EEF1A1P34-001 processed_pseudogene Homo_sapiens 0 342
ENST00000420064 RP11-175P19.2-001 transcribed_processed_pseudogene Homo_sapiens 0 444
ENST00000421195 EEF1A1P14-001 processed_pseudogene Homo_sapiens 0 617
ENST00000427807 EEF1A1P36-001 processed_pseudogene Homo_sapiens 0 348
ENST00000429708 EEF1A1P30-001 processed_pseudogene Homo_sapiens 0 455
ENST00000429983 EEF1A1P27-001 processed_pseudogene Homo_sapiens 5e-31 139
ENST00000434005 EEF1A1P6-001 processed_pseudogene Homo_sapiens 0 785
ENST00000436459 EEF1A1P5-001 processed_pseudogene Homo_sapiens 0 798
ENST00000443590 EEF1A1P12-001 processed_pseudogene Homo_sapiens 0 749
ENST00000449483 RP11-175P19.2-002 processed_transcript Homo_sapiens 0 315
ENST00000450915 EEF1A1P28-001 processed_pseudogene Homo_sapiens 0 564
ENST00000451469 EEF1A1P24-001 processed_pseudogene Homo_sapiens 0 691
ENST00000455918 EEF1A1-003 protein_coding Homo_sapiens 0 460
ENST00000475365 EEF1A1P10-001 processed_pseudogene Homo_sapiens 0 699
ENST00000488500 EEF1A1-011 retained_intron Homo_sapiens 0 811
ENST00000490569 EEF1A1-008 retained_intron Homo_sapiens 0 811
ENST00000491404 EEF1A1-014 processed_transcript Homo_sapiens 0 472
ENST00000495333 EEF1A1-002 retained_intron Homo_sapiens 0 464
ENST00000503537 EEF1A1P13-001 processed_pseudogene Homo_sapiens 0 760
ENST00000509116 RP11-553P9.1-001 processed_pseudogene Homo_sapiens 0 641
ENST00000513637 EEF1A1P19-001 processed_pseudogene Homo_sapiens 0 734
ENST00000514975 EEF1A1P9-001 processed_pseudogene Homo_sapiens 0 732
ENST00000547505 EEF1A1P17-001 processed_pseudogene Homo_sapiens 0 497
ENST00000559385 EEF1A1P22-001 processed_pseudogene Homo_sapiens 0 660
ENST00000567658 EEF1A1P38-001 processed_pseudogene Homo_sapiens 0 680
ENST00000596811 EEF1A1P7-001 processed_pseudogene Homo_sapiens 0 590
ENST00000605239 AP000436.4-001 processed_pseudogene Homo_sapiens 0 411
ENST00000610520 EEF1A1-201 protein_coding Homo_sapiens 0 636
ENST00000615060 EEF1A1-202 protein_coding Homo_sapiens 0 811

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