C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126614 Eef1a1-006 ENSMUSG00000037742 10090 - 9:78479665-78480688 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0002 CGP 9:78448208-78489151
CIL_0006PR CIL_0006PR_0002 CGP 9:78478449-78588041

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 582
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 582
ENST00000309268 EEF1A1-009 protein_coding Homo_sapiens 0 922
ENST00000316292 EEF1A1-001 protein_coding Homo_sapiens 0 922
ENST00000325349 EEF1A1P16-001 processed_pseudogene Homo_sapiens 0 736
ENST00000331523 EEF1A1-004 protein_coding Homo_sapiens 0 922
ENST00000356303 EEF1A1-015 protein_coding Homo_sapiens 0 643
ENST00000359165 EEF1A1P4-001 processed_pseudogene Homo_sapiens 0 728
ENST00000401075 RP11-439L8.2-001 processed_pseudogene Homo_sapiens 0 446
ENST00000415278 EEF1A1P11-001 processed_pseudogene Homo_sapiens 0 835
ENST00000416082 EEF1A1P29-001 processed_pseudogene Homo_sapiens 0 459
ENST00000417549 EEF1A1P3-001 processed_pseudogene Homo_sapiens 0 734
ENST00000419025 EEF1A1P8-001 processed_pseudogene Homo_sapiens 0 778
ENST00000419888 EEF1A1P34-001 processed_pseudogene Homo_sapiens 0 381
ENST00000420064 RP11-175P19.2-001 transcribed_processed_pseudogene Homo_sapiens 0 483
ENST00000421195 EEF1A1P14-001 processed_pseudogene Homo_sapiens 0 712
ENST00000427807 EEF1A1P36-001 processed_pseudogene Homo_sapiens 0 416
ENST00000429708 EEF1A1P30-001 processed_pseudogene Homo_sapiens 0 553
ENST00000429983 EEF1A1P27-001 processed_pseudogene Homo_sapiens 0 211
ENST00000430498 RP11-104D3.2-001 processed_pseudogene Homo_sapiens 0 466
ENST00000434005 EEF1A1P6-001 processed_pseudogene Homo_sapiens 0 900
ENST00000436459 EEF1A1P5-001 processed_pseudogene Homo_sapiens 0 913
ENST00000443590 EEF1A1P12-001 processed_pseudogene Homo_sapiens 0 863
ENST00000445363 AC010240.2-001 processed_pseudogene Homo_sapiens 0 248
ENST00000449483 RP11-175P19.2-002 processed_transcript Homo_sapiens 0 311
ENST00000450915 EEF1A1P28-001 processed_pseudogene Homo_sapiens 0 651
ENST00000451469 EEF1A1P24-001 processed_pseudogene Homo_sapiens 0 795
ENST00000455918 EEF1A1-003 protein_coding Homo_sapiens 0 457
ENST00000475365 EEF1A1P10-001 processed_pseudogene Homo_sapiens 0 802
ENST00000488500 EEF1A1-011 retained_intron Homo_sapiens 0 965
ENST00000490569 EEF1A1-008 retained_intron Homo_sapiens 0 922
ENST00000491404 EEF1A1-014 processed_transcript Homo_sapiens 0 501
ENST00000495333 EEF1A1-002 retained_intron Homo_sapiens 0 468
ENST00000503537 EEF1A1P13-001 processed_pseudogene Homo_sapiens 0 869
ENST00000509116 RP11-553P9.1-001 processed_pseudogene Homo_sapiens 0 745
ENST00000513637 EEF1A1P19-001 processed_pseudogene Homo_sapiens 0 843
ENST00000514975 EEF1A1P9-001 processed_pseudogene Homo_sapiens 0 835
ENST00000547505 EEF1A1P17-001 processed_pseudogene Homo_sapiens 0 595
ENST00000559385 EEF1A1P22-001 processed_pseudogene Homo_sapiens 0 761
ENST00000567658 EEF1A1P38-001 processed_pseudogene Homo_sapiens 0 785
ENST00000596811 EEF1A1P7-001 processed_pseudogene Homo_sapiens 0 699
ENST00000605239 AP000436.4-001 processed_pseudogene Homo_sapiens 0 477
ENST00000610520 EEF1A1-201 protein_coding Homo_sapiens 0 632
ENST00000615060 EEF1A1-202 protein_coding Homo_sapiens 0 922

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