C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: HECT domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041180 Hectd2 10090 + 19:36554639-36621135 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047247 Hectd2-001 36554669-36621135 protein_coding
  ENSMUST00000139215 Hectd2-002 36554639-36621132 nonsense_mediated_decay
  ENSMUST00000141503 Hectd2-004 36554678-36597381 retained_intron
  ENSMUST00000142404 Hectd2-007 36605167-36612398 retained_intron
  ENSMUST00000149629 Hectd2-003 36554669-36591147 retained_intron
  ENSMUST00000155447 Hectd2-006 36554835-36569797 retained_intron
  ENSMUST00000155594 Hectd2-005 36554866-36618844 nonsense_mediated_decay
  ENSMUST00000169036 Hectd2-009 36554668-36620242 protein_coding
  ENSMUST00000177381 Hectd2-008 36585489-36618844 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047247ENSMUST00000139215ENSMUST00000141503ENSMUST00000142404ENSMUST00000149629ENSMUST00000155594ENSMUST00000169036ENSMUST00000177381
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047247 N/A 0.170±0.02 N/A N/A N/A 0.199±0.03 N/A N/A N/A N/A N/A 0.082±0.00 N/A
ENSMUST00000139215 N/A N/A N/A N/A 0.308±0.00 N/A 0.102±0.00 N/A N/A N/A 0.289±0.07 N/A N/A
ENSMUST00000141503 N/A 0.390±0.20 N/A N/A 0.524±0.00 0.606±0.20 0.262±0.04 N/A 0.397±0.00 N/A 0.692±0.12 N/A N/A
ENSMUST00000142404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.038±0.00 N/A N/A
ENSMUST00000149629 0.260±0.02 0.049±0.00 N/A N/A 0.233±0.05 0.148±0.08 0.052±0.00 N/A 0.087±0.02 N/A 0.284±0.12 N/A N/A
ENSMUST00000155594 N/A N/A N/A N/A 0.601±0.00 N/A 0.095±0.00 N/A N/A N/A N/A 0.230±0.10 1.533±0.00
ENSMUST00000169036 1.188±0.13 0.131±0.06 0.858±0.00 2.987±1.34 0.555±0.16 0.276±0.06 0.127±0.04 0.250±0.09 0.215±0.13 0.952±0.23 0.521±0.26 0.335±0.17 5.110±2.15
ENSMUST00000177381 N/A N/A N/A 2.704±0.00 N/A N/A 0.198±0.00 N/A 0.255±0.00 N/A 0.491±0.13 0.279±0.12 2.580±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018O CIL_00018O_0002 CGP 19:36379067-36621135
CIL_0008L8 CIL_0008L8_0002 VISTA 19:36386377-36989836
CIL_00018N CIL_00018N_0002 CGP 19:36554639-36736653

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IBA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061194 hectd2 HECT domain containing 2 protein_coding Danio_rerio
ENSG00000165338 HECTD2 HECT domain containing E3 ubiquitin protein ligase 2 protein_coding Homo_sapiens

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