C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00018O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180628-ENSG00000165338 CGP 9606 10:91163012-91514829
GeneTranscriptPositionBiotype
ENSG00000165338 (HECTD2)
HECT domain containing E3 ubiquitin protein ligase 2
ENST00000298068 (HECTD2-005) 91410345-91514761 protein_coding
ENST00000371667 (HECTD2-003) 91484108-91514829 protein_coding
ENST00000371681 (HECTD2-001) 91410344-91463664 protein_coding
ENST00000446394 (HECTD2-201) 91410285-91514826 protein_coding
ENST00000498446 (HECTD2-002) 91484090-91489981 processed_transcript
ENSG00000180628 (PCGF5)
polycomb group ring finger 5
ENST00000336126 (PCGF5-001) 91220788-91284331 protein_coding
ENST00000490164 (PCGF5-002) 91220783-91227960 processed_transcript
ENST00000496708 (PCGF5-003) 91220177-91222929 processed_transcript
ENST00000543648 (PCGF5-201) 91220151-91284329 protein_coding
ENST00000614189 (PCGF5-202) 91163012-91284329 protein_coding
ENSG00000271385 (RP11-108M11.3)
ENST00000604630 (RP11-108M11.3-001) 91464578-91464708 processed_pseudogene
CIL_00018O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024805-ENSMUSG00000041180 CGP 10090 19:36379067-36621135
GeneTranscriptPositionBiotype
ENSMUSG00000024805 (Pcgf5)
polycomb group ring finger 5
ENSMUST00000062389 (Pcgf5-201) 36409748-36456192 protein_coding
ENSMUST00000071267 (Pcgf5-202) 36379067-36456192 protein_coding
ENSMUSG00000041180 (Hectd2)
HECT domain containing 2
ENSMUST00000047247 (Hectd2-001) 36554669-36621135 protein_coding
ENSMUST00000139215 (Hectd2-002) 36554639-36621132 nonsense_mediated_decay
ENSMUST00000141503 (Hectd2-004) 36554678-36597381 retained_intron
ENSMUST00000142404 (Hectd2-007) 36605167-36612398 retained_intron
ENSMUST00000149629 (Hectd2-003) 36554669-36591147 retained_intron
ENSMUST00000155447 (Hectd2-006) 36554835-36569797 retained_intron
ENSMUST00000155594 (Hectd2-005) 36554866-36618844 nonsense_mediated_decay
ENSMUST00000169036 (Hectd2-009) 36554668-36620242 protein_coding
ENSMUST00000177381 (Hectd2-008) 36585489-36618844 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018O_0001ENSG00000165338ENST00000298068ENST00000371667ENST00000371681ENST00000446394ENST00000498446ENSG00000180628ENST00000336126ENST00000490164ENST00000496708ENST00000543648ENST00000614189ENSG00000271385ENST00000604630CIL_00018O_0002ENSMUSG00000024805ENSMUST00000062389ENSMUST00000071267ENSMUSG00000041180ENSMUST00000047247ENSMUST00000139215ENSMUST00000141503ENSMUST00000142404ENSMUST00000149629ENSMUST00000155447ENSMUST00000155594ENSMUST00000169036ENSMUST00000177381
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00018O_0001ENSG00000165338ENST00000298068ENST00000371667ENST00000371681ENST00000446394ENST00000498446ENSG00000180628ENST00000336126ENST00000490164ENST00000543648ENST00000614189ENSG00000271385ENST00000604630CIL_00018O_0002ENSMUSG00000024805ENSMUST00000062389ENSMUST00000071267ENSMUSG00000041180ENSMUST00000047247ENSMUST00000139215ENSMUST00000141503ENSMUST00000142404ENSMUST00000149629ENSMUST00000155594ENSMUST00000169036ENSMUST00000177381
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165338 ENST00000298068 1.008±0.00 0.916±0.00 N/A 1.459±0.76 0.892±0.07 0.931±0.65 0.449±0.06 2.027±0.00 2.786±2.48 0.929±0.03 0.763±0.00 1.765±1.19 0.594±0.06 2.153±0.67
ENST00000371667 N/A N/A 0.138±0.00 0.700±0.00 N/A N/A N/A N/A N/A 0.717±0.00 N/A N/A N/A N/A
ENST00000371681 N/A N/A N/A 0.848±0.00 N/A N/A 0.200±0.00 N/A N/A 0.582±0.00 N/A 0.523±0.27 0.314±0.02 0.819±0.00
ENST00000446394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A N/A
ENST00000498446 N/A N/A 0.197±0.00 N/A N/A 0.320±0.00 0.083±0.00 0.227±0.00 2.365±0.00 0.993±0.00 N/A 0.677±0.00 N/A N/A
ENSG00000180628 ENST00000336126 5.140±0.00 1.347±0.00 N/A N/A 1.856±0.00 N/A 3.047±0.00 1.510±0.00 N/A 1.601±0.00 N/A 2.127±0.28 1.524±0.33 5.389±2.11
ENST00000490164 N/A 10.999±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.596±0.00 5.004±0.26 8.482±4.07 N/A
ENST00000496708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.038±0.00
ENST00000614189 1.458±0.00 4.146±0.00 2.124±0.00 9.198±3.12 3.488±0.41 7.229±1.65 4.375±2.01 6.272±1.62 5.620±1.56 5.029±3.44 4.901±3.77 2.745±1.00 2.539±0.00 N/A
ENSG00000271385 ENST00000604630 N/A N/A N/A 33.350±0.00 N/A N/A N/A N/A 15.506±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024805 ENSMUST00000062389 3.653±0.49 2.047±1.09 6.585±0.52 2.038±1.26 4.061±0.79 3.224±1.05 13.865±1.54 3.833±1.20 3.451±2.76 3.949±1.75 4.507±0.50 2.610±0.88 32.828±10.65 14.164±6.41
ENSMUST00000071267 N/A 1.779±0.31 6.062±0.00 N/A N/A N/A N/A 0.880±0.00 2.080±0.79 1.396±0.00 N/A 1.833±0.69 23.412±7.61 N/A
ENSMUSG00000041180 ENSMUST00000047247 N/A 0.170±0.02 N/A N/A N/A 0.199±0.03 N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A
ENSMUST00000139215 N/A N/A N/A N/A 0.308±0.00 N/A N/A 0.102±0.00 N/A N/A N/A 0.289±0.07 N/A N/A
ENSMUST00000141503 N/A 0.390±0.20 N/A N/A 0.524±0.00 0.606±0.20 N/A 0.262±0.04 N/A 0.397±0.00 N/A 0.692±0.12 N/A N/A
ENSMUST00000142404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.038±0.00 N/A N/A
ENSMUST00000149629 0.260±0.02 0.049±0.00 N/A N/A 0.233±0.05 0.148±0.08 N/A 0.052±0.00 N/A 0.087±0.02 N/A 0.284±0.12 N/A N/A
ENSMUST00000155447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155594 N/A N/A N/A N/A 0.601±0.00 N/A N/A 0.095±0.00 N/A N/A N/A N/A 0.230±0.10 1.533±0.00
ENSMUST00000169036 1.188±0.13 0.131±0.06 0.858±0.00 2.987±1.34 0.555±0.16 0.276±0.06 N/A 0.127±0.04 0.250±0.09 0.215±0.13 0.952±0.23 0.521±0.26 0.335±0.17 5.110±2.15
ENSMUST00000177381 N/A N/A N/A 2.704±0.00 N/A N/A N/A 0.198±0.00 N/A 0.255±0.00 N/A 0.491±0.13 0.279±0.12 2.580±0.00

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